result

Gene information

Detail information of AfisC5G00618

Location

Gene	Chr	Start	End	Strand
AfisC5G00618	chr5	117997491	117999535	-

Sequences

CDS

Protein

Gene

>AfisC5G00618
ATGAACAAAAAGCTAAGGCTAAGGATCACAAACGCAATATCAAGCACATTCAACTCTTGCAAACCAAAAAACAACACCTCCACGAACCCAGCTCAAGTCTTCTACCTCTCCCCTTCCAACCCCAAAATCCACGACATCGAGTTCCCAACTCCGCCTCCTCCTCCTCGTTCTTCTCCTTCCCGCCGCCTCTCCTCCGTCCTTGTCCCGAGGTGGGAGGAGGACACGGACGACTTGTCTCGAGCTCGCTCCACGCCCGGGTATTTGTGGCGCAAGGATGAGAAATGGCTTGCTGTTACCACTGTCTCCAATGGAGACGGACTTCAGAAGTTTCGTACAAGGCCAAAGATCGATTGTCAAAGTAATGAACTTGTCCATGACGACGACGACGACGACGATCGGTTTGACCATGTTGTGAAATTAGCTTCAAGAAGGTATAATAATTAGCTGCAGTGCACACTTTACCCATTTTCACAACTTTCAAAAGACCCAGCTATTTCTTATTTTTATAGGTTTTGAAATTGGATATATGGTCTGAAACTTGGATTGTAATTTTTACCAGGTAGACAGGAAAACTCTGTACTTTAAAAGAAAAAAAAAAAAAACCTTTTGAAAGTATTTAAATGGCCAATTTGGCTGTGTATTAGTGTACAAGTAGTACAAATTAGTGATGATAAATATTGACTTGGATTACACAACTAATGCTGTTAAATGATGATCAATTTGATGATGTATTATTATCTTCAAAAAAAGGAAAAAAAAATAAAATATAAAAAAACAAAAAAAACTAGATATTTCATACTTTAAAATTAATCACACTTTAATTGGTAATTAGGACCACTTTCAGAAACATATTTCATACTTTAAAATTTAAACAGTTTAAAACTAGATAAAAATTGGTACTTTGAACCAGGCTGTTTGGAACCGCACAAGTACAAATTTAAGTACGAAATATCACTTTTTAATATAGGGAAAATAATAATTAAAAAACCGTTTTATGTACGTATTTTAAAAGATATTTTATCATTTTAGCCACTATTCAAAAACAGATAACAAATTTAATCATGTTCCAAATTATACTAGGACATGTACCTTTGACATGTTAAACCAGCAATTTTCTCTTGCTCAATTTGGATTTGCCCTAAACTAGTTTTGTTCAGAATTTTTTTTTTTTTTACGCTCACACGTTATCGAAGTTCAGCATGACAAAAAATAACTGCAGTAAGTTTTGAAATGAGCTTGAATTTGTCATAGGATTTGAAAAGCAAACTAGATTAACAAATAAATTTAATAAATAAGTAAAATCCAATTTTAATTTTGAATGTACATCTATAAATAGCAACTCAAATTAGTGATGAAGAATATTGATATCATGTATAGGAGAAGAGAGAAGGAAATGAGGAGACGAGCTCAAACAAGAGGAAGAAAATCAAGATCAAAAAGCAGAAACAGCACGTCATCCATGGCAAGCACAGGTACATGGTTCTCCAGCGAAGAAGATAATGAGAGGGAGGAGGAGGATTTGTACCATGATGACGATGAGGGAGAGGATACAGACACTTTGCTATCATCTAGAAGCTTTGAAGGGGATTCTTCTAGAATCAAACAACCAAGATCAGCCGTCTCTTCAGGATCATGTGGGACTGCGATGTTGAGTAGGATCTGTGGAGGCGACGAAGGAAGAGTGAAGGAAAGCTTTGCAGTAGTGAAGAGATCGGAAGATCCTAGAGGGGATTTTAGAAGATCCATGGCGGAGATGGTGGTCGAGAAAGGCATTTATGAAGCTGAGGACTTGGAGCATCTGCTGCATTGCTTTTTGTCCTTGAATCATAACCAGCATCATGGTGCTATTGTTTCTGCCTTTGCTGATATCTGGGAAGCTGTTTTTCCTCAAAATTCACCTCATTTTAGTAGTGACATGAATAAAGTTTGATTTTGTTATGTATGCGATTATCTGTTATGTAATTTATTTTTCTTTTATGCTATGGATGGAGCGTTTGTTAAGTGTTGTATGATACATATATATTGGAATCATTACTTTGAACTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008795663.1	1.5e-25	transcription repressor OFP7-like
Swissprot	Q94CV1.1	3.2e-12	OVATE family protein 8
trEMBL	A0A8B7CBK6	1.1e-25	Transcription repressor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G18500.1	54.05	2e-18	89.7	ATOFP7;OFP7	ovate family protein 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G00618	AT2G18500.1	74	34	239	312	217	290	54.05	2e-18	89.7
AfisC5G00618	AT5G19650.1	66	29	248	313	154	219	56.06	8e-18	87.8
AfisC5G00618	AT2G36026.1	60	26	254	313	92	151	56.67	8e-15	78.2

Ortholog group

Species	Genes
Allium cepa	g481483.t1
Allium fistulosum	AfisC5G00618
Allium sativum	Asa6G06564.1
Arabidopsis thaliana
Oryza sativa	LOC_Os03g10150.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04844.10	Ovate	Family	256	312	88.1	2.5e-25

Gene Ontology

Accession	Ontology	Name
GO:0045892	P	negative regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network