result

Gene information

Detail information of AfisC5G00809

Location

Gene	Chr	Start	End	Strand
AfisC5G00809	chr5	154624673	154626786	-

Sequences

CDS

Protein

Gene

>AfisC5G00809
AATTATTAAAGATAGGTAAAATGCTAGGGCACTATATGATCCATCATTCCAAGTTTCCAAAACAAATAAAAATATAACTACAAACAACACTCATGATATATAGTATACACAAACTAAAATAAAGAAAAGTGAGTAGGAAGAGGAGGAGGAGGAAGAAAGTAATTAATGGAAGGGAGTTGCTGCTCCACAAGCTCAAAGAATAACGGAAAAGCGTCAGCATCATCATCAACGAGAATCCAAAAACAAGAAGAAGGGAATCGGTGCTGCAAAGAGAAGATATACAGAGGAGTGAGGATGAGAAAATGGGGAAAATGGGTGGCCGAGATCAGAGAACCCAACAAGCGGTCCAGAATATGGCTGGGGTCGTACTGCAGCCCAATAGCTGCGGCCCGTGCTTACGACACGGCTGTCTTCCTCCTCAGAGGCCCCTCAGCCAAACTCAACTTTCCCGACGACGCGTCCAAATTGGACGAAGAAGATATCGGGAATGGAGCCGGATGTTATACGGCAGCGTATATAAGGAAGAAAGCAACTGAAGTTGGAGCACGGGTCGATGCCGTTGCTGCTGCTGCTGCTGCTGCTGCTGGTGCTGGTGCAGTGCAGATGAGTAGTACTGCGTATTCGACTACGGAGCAGAAGAGGATTTGGAAGAATCCTGACCTTAACCAACACCCTTCTCCTCATTCTTCTGATGATGATTTATGATTAGTTTTCCTTTATTACCTGTGTTTTATGGTTAGTGATTCTAATTATTTCGATTCAGTTACCATGCTATTGATCATTCTAGCCTTCCTTTTGTTTTGTTGGTTTTCACGTTATTAAGGAGTTAATTACTCTTCATGTTGAATGTGAACTTTATCCTTGTATGATTGGGTACCTGGTTTTGAGAAAATTAAATGGTGAAATTTGTTAACTAATTTTAGAACTTGTTAGATATATAGTTCAAAGCCATTAATCACTTTGTTGCAGTCTGCCAACTCAATGTGCATACATACAGTTTTTAAAAAAAAAAAACAGAAAATTTAAAATAAATTATGACAGACAATTGTTGGAATTAATAAGCCATCTTCAAAAAAAGTTTATAATAAATTACTGAATACAGAAAACATGGATTTGATATGAAGGTTAAGAAAAAGAATTTGTATACTTCAGAATGGGGGAAACGACTGATCAGTTTACCATCAAATCATTTAATATCCACTGAAGTTCAATTATATTCATCTGATATCACATAATTTGAACAAAAAATTCAACACTCTGCAATACCTTTCAGTTAATATTATCCCAGAAATATAAAATTAGTACCACAGCAACTCTAAAGCTGAGTCTGTTTGAAAAAATGGATACAGTATACACTAGTTTACATAAAGCAAACTAGGGATATGCCTTGTTTCAGGTATAATTAAACCAAACGGACATAAAACAAATTGTGTACTTGCAAAGGCAGTCTGTAATTGTCAAAGTGACAACCAATTTAAGCCATTATATAAATGAATATTTTTGTCACCAAGGTTCATGTTGAAATGATAGGCATAAAATCAATGTCAATATAAAATGTGCATGATTGTCAATTTTTTTGTACTGACTTCTCATTTTATAATGCTCAATTATTCTTTGTATATTGATAGGGCACTTTTTAATCTTCTGCGTGGTTTCACATGTGCTCCAAAGTGTTACACATATATTTTTCTAATGTTAGCCTAGGTATACGTATTATTGAATGTGAAATGAAATGAGACAAGTGCAAGGTTTTAAACGTTATATGTCACAATCTATTACAGATACAGATGATATGCACAAGAATATAACCACTGCAAGGCCCAAGAGGTGACTATGGCTCCTAGAAGGCTCTATGAATGGGAGCATTTCAAATTGATTAAAAGCACATGCAAAATGGTTGGAGTAGAAGACAAATTAGTTCTATGTGCAATTTCGTTTGTTTCCTTTAGCAAAAGTTTGTTTAAAAAAAAAGGCTTATATAACGTCAACTTTGAAAATTGTAAGCTTCGGTTCAATTTCTCTATCCTCATTTCATATGTTCCCTTATTCCAATTTCATCATAGCCATTAATTCTTGTATAAATTTATTATTTTAACAGTATAGCAATATCTAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009408015.1	2.1e-37	PREDICTED: ethylene-responsive transcription factor ERF010-like
Swissprot	O22174.1	1.5e-32	Ethylene-responsive transcription factor ERF008
trEMBL	A0A804JSH6	1.5e-37	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23340.1	54.55	1e-37	152	DEAR3	DREB and EAR motif protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G00809	AT2G23340.1	154	61	2	30	178	19	168	54.55	1e-37	152
AfisC5G00809	AT1G46768.1	147	45	4	26	170	18	148	57.14	4e-36	147
AfisC5G00809	AT3G50260.1	150	48	4	35	179	17	150	54.00	9e-36	146

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	38	86	39.7	3.8e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0002213	P	defense response to insect
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009737	P	response to abscisic acid
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009825	P	multidimensional cell growth
GO:0009873	P	ethylene-activated signaling pathway
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0010941	P	regulation of cell death
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0034605	P	cellular response to heat
GO:0043565	F	sequence-specific DNA binding
GO:0051301	P	cell division
GO:0071497	P	cellular response to freezing

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network