Gene | Chr | Start | End | Strand |
---|---|---|---|---|
AfisC5G00881 | chr5 | 165821978 | 165830746 | + |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020263178.1 | 5.4e-169 | PHD finger protein EHD3-like |
Swissprot | Q6ZJM9.1 | 6.3e-82 | Proetin EARLY HEADING 3 |
trEMBL | A0A5P1E186 | 2.2e-116 | PHD-type domain-containing protein |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT1G77250.1 | 33.87 | 5e-61 | 233 | RING/FYVE/PHD-type zinc finger family protein |
Species | Genes |
---|---|
Allium cepa | g416681.t1 |
Allium fistulosum | AfisC5G00881 |
Allium sativum | Asa6G06346.1 |
Arabidopsis thaliana | |
Oryza sativa |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF02892.12 | zf-BED | Domain | 67 | 109 | 32.0 | 8.2e-08 |
PF02892.12 | zf-BED | Domain | 201 | 235 | 22.0 | 0.00011 |
PF00628.26 | PHD | Domain | 617 | 668 | 33.1 | 3.5e-08 |
PF00628.26 | PHD | Domain | 806 | 851 | 41.7 | 6.9e-11 |
Accession | Ontology | Name |
---|---|---|
GO:0005515 | F | protein binding |
GO:0003677 | F | DNA binding |
GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
GO:0003714 | F | transcription corepressor activity |
GO:0005737 | C | cytoplasm |
GO:0016491 | F | oxidoreductase activity |
GO:0007338 | P | single fertilization |
GO:0007526 | P | larval somatic muscle development |
GO:0010628 | P | positive regulation of gene expression |
GO:0045892 | P | negative regulation of transcription, DNA-templated |
GO:0030717 | P | karyosome formation |
GO:0033601 | P | positive regulation of mammary gland epithelial cell proliferation |
GO:0034647 | F | histone demethylase activity (H3-trimethyl-K4 specific) |
GO:0034648 | F | histone demethylase activity (H3-dimethyl-K4 specific) |
GO:0034721 | P | histone H3-K4 demethylation, trimethyl-H3-K4-specific |
GO:0036098 | P | male germ-line stem cell population maintenance |
GO:0043970 | P | histone H3-K9 acetylation |
GO:0043992 | F | histone acetyltransferase activity (H3-K9 specific) |
GO:0045475 | P | locomotor rhythm |
GO:0046425 | P | regulation of JAK-STAT cascade |
GO:0060444 | P | branching involved in mammary gland duct morphogenesis |
GO:0060763 | P | mammary duct terminal end bud growth |
GO:0061038 | P | uterus morphogenesis |
GO:0070193 | P | synaptonemal complex organization |
GO:0070822 | C | Sin3-type complex |
GO:2000737 | P | negative regulation of stem cell differentiation |
GO:2000864 | P | regulation of estradiol secretion |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |