Detail information of AfisC5G00961


Location
GeneChrStartEndStrand
AfisC5G00961chr5181011970181021117+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010938138.14.7e-45WUSCHEL-related homeobox 11
SwissprotB8B644.12.4e-38WUSCHEL-related homeobox 11
trEMBLA0A6I9SEJ03.4e-45WUSCHEL-related homeobox 11

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G03660.145.121e-43 173WOX11WUSCHEL related homeobox 11

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag260477.t1
Allium fistulosumAfisC5G00961
Allium sativum
Arabidopsis thalianaAT3G03660.1; AT3G03660.2; AT5G17810.1; AT5G17810.2
Oryza sativaLOC_Os07g48560.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain238354.56.7e-15

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated
GO:0030010Pestablishment of cell polarity
GO:0008284Ppositive regulation of cell proliferation
GO:0009735Presponse to cytokinin
GO:0010075Pregulation of meristem growth
GO:0044212Ftranscription regulatory region DNA binding
GO:0043565Fsequence-specific DNA binding
GO:0048825Pcotyledon development
GO:0048830Padventitious root development
GO:0090451Pcotyledon boundary formation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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