result

Gene information

Detail information of AfisC5G00995

Location

Gene	Chr	Start	End	Strand
AfisC5G00995	chr5	187151232	187152851	+

Sequences

CDS

Protein

Gene

>AfisC5G00995
GATAATCAGAAATGTTTGAATTCAACGGAAAAGATACATCAAGAGAGAGAAACGCAGTATCAATGCAGAAGAAGAGAAAAGGATGTATTGACATTATCCTTTCAATGCTTTCAAAAACCAACTCTCGTAAGGTACTTAATGTCTTTAAGATCGCATATATAGTAAATTATATATCTTTATAATCTGTAATTTGTGTAACTTGATCAAGGCTACCAAAGTTGAAGAAGTGTACCTGCAATCAGCATACAAACAGCAGGTAGAAAAGATGCAAGATTATTTAACATATTCCCCGCATATGGCTAAAGAGAATGGTATGGATCCAAATTCAAGCAATGGTCACACTAAGCATCCAAATCATCCACCTTCAGATTTTGGAAATTTCCATTTCGACGCCATTAAAGTTCATGCAAGAATCAATGGTTGGTACATCGAGCCAAATGAGGTAACATGTGAATTGATCAGATCATTAGTGTCATTACGAAATGAATGAAAAATGTTACTTGTCTCATCATCATATGTGTCTTGGTATACATATATTAAATACTTAACTATATATATGGCAGATCGAGTTTCATGAAAAAATAGGAGAAGGAACTACGGCAGCCATATACAGAGGCACATGGAGAGGTCTTGATGTTGCAGTAAAATGCCTAAACCCTAGTTACTTTCATGAAACAGAATGCAGTACAAGTTGGTTTGCACAGGAACTGGACACCTTATCAAGACAGCGCCATCCATTTGTATTACAGTTACTTGGTGCATGCCTTCAGCCGCCTGAAAATGCATGGATAGTCACAGAGTTATTGAGTAAAAAGACCATAGCAGAATATCTATATGGACATAAGAAAAGGCACATAAAGAGATCTATACAAATTCCTCCCTTGAAAGATAGACTTGAGAAAGGATTAGAAATTGCTCTGGGAATGCAGTACCTTCATGAACAAAAACCGAAAGTTATTCACAGAGATTTGAAGCCGAGTAACGTATTACTGGATGATTCGATGCACGTTCGTATAGCTGATTTTGGTCATGCTCGATTTCTTCTTGATGGGGAGCAAGCACTTACTGGAGAAATGGGTACACATGTTCATGTATACATACATAGAGCTCATAACTTCGTATGACATGAATAATAGTGCACTTCTTTTTACAGGGACTTTTGTTTATATGGCACCCGAGGTGATCAGAAATGAGCCATACAATGAGAAATGTGATGTGTATAGTTTTGGTGTGATATTGAATGAGCTGATCACTGGTGAACGGCCTTACTATGAAACTAATTATGGCCCAAGCCAGGTATAGTTTGGTGTTGTAGTTAAATCATACATATCTAAGATGAAAAAATTAATTTGTTCATGTTTATTAACTATAGATTGCAGTTGGGGTTGCGGAGAGAAGACTAAGACCAAAACTTCCTCAAGAGAATAATCGGTTGAAAGAGCTTACAGAACTTATATGTAGTGCATGGAGTGAAGATATTTTGTCTAGACCGACATTTGCAGTGATTACTTTAACCATAAAACAGATTTTGGAGACTCAGTTTGTTGATTGTGCAGTTATGGAACCAAATTAGTCATAAAAATATACAACATAATCCAAAATTTCTTGTATCCAAATAAT

Functional annotation

Database	accession number	e-value	annotation
nr	ONK66142.1	2.4e-81	uncharacterized protein A4U43_C06F4570
Swissprot	Q5UQG7.1	5.8e-24	Putative serine/threonine-protein kinase/receptor R818
trEMBL	A0A8K0I1Y6	7.8e-82	Serine/threonine-protein kinase STY46

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G06640.1	36.65	4e-24	108		PAS domain-containing protein tyrosine kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G00995	AT3G06640.1	161	91	3	117	277	444	593	36.65	4e-24	108
AfisC5G00995	AT1G67890.2	160	87	4	118	277	486	634	38.75	3e-23	105
AfisC5G00995	AT1G67890.1	160	87	4	118	277	486	634	38.75	3e-23	105

Ortholog group

Species	Genes
Allium cepa	g425047.t1
Allium fistulosum	AfisC5G00995
Allium sativum	Asa6G02310.1
Arabidopsis thaliana
Oryza sativa	LOC_Os09g27150.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	119	284	100.1	1.1e-28

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016020	C	membrane
GO:0004713	F	protein tyrosine kinase activity
GO:0007165	P	signal transduction
GO:0005737	C	cytoplasm
GO:0006468	P	protein phosphorylation
GO:0023051	P	regulation of signaling
GO:0044763	P	single-organism cellular process
GO:0061337	P	cardiac conduction

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network