Detail information of AfisC5G01057


Location
GeneChrStartEndStrand
AfisC5G01057chr5200251365200254030+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010939836.13.6e-175fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic
SwissprotQ9XI84.12.4e-163[Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase-like
trEMBLA0A8J5LIH11.8e-176SET domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G14030.164.092e-166 582LSMT-LRubisco methyltransferase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag343781.t1
Allium fistulosumAfisC5G01057
Allium sativumAsa6G06249.1
Arabidopsis thalianaAT1G14030.1
Oryza sativaLOC_Os09g24530.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00856.25SETFamily10126523.36.2e-05
PF09273.8Rubis-subs-bindDomain34246685.15.5e-24

Gene Ontology
AccessionOntologyName
GO:0009570Cchloroplast stroma
GO:0016279Fprotein-lysine N-methyltransferase activity
GO:0018023Ppeptidyl-lysine trimethylation
GO:0018026Ppeptidyl-lysine monomethylation
GO:0030785F[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity
GO:0050794Pregulation of cellular process
GO:0097659Pnucleic acid-templated transcription

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K00592RBCMT; [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferaseEC:2.1.1.127 2.1.1.259 --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.