result

Gene information

Detail information of AfisC5G01194

Location

Gene	Chr	Start	End	Strand
AfisC5G01194	chr5	226177705	226180763	+

Sequences

CDS

Protein

Gene

>AfisC5G01194
ATGAGTAGTAAGCATTCTTGCTGCTACAAACAAAAGCTCAAGAAAGGGCTATGGTCTCCTAAGGAAGATGAGAAGCTTTTTAATCATATTACCAAGTATGGCCATGGCTGCTAGAGCTCTGTTCCTAAACAAGCAGGTATAATTTTATGGTTTATATTACATGCTAAGCATATAATGCATCTATTGCTATAGTATTCCAAACCAAAATTTGAGGCAAATTGTACTAATATGGTTATTTTGCTTACTATGACAATAGGCCTTCAGAGATGTGGTAAAAGCTGCAGGCTAAGATAGATAAATTACCTAAGGCCTGATTTGAAAAGAGGAGCATTTTCAGAAGAGGAAAAAAATCTGATAATTGACCTCCATTCAGTTCTAGGCAACAGGTATAAATAAACCAGATGATATGTAAATTTAACTGAAGATATGATAGAATAATCTTATATGAAACTATACGTGTTTAGGTGGTCTCAAATAGCAGCACAGTTGCCAGGGAGAACAGACAATGAGATAAAGAATTTATGGAATTCTAGCATTAAGAAAAAGCTAAGGCAAAATGGAATTGATCCTAATACACATAATCCATTATTTGAAATCGAAATAACAGAAGCTAGCAGCAAATCGATAGACGAACATATAATCCCACCATTAATTCCAGGTGAAAGTTCATTTACGAATCCATGCAATGTAGGCCAGAGTCAAAATTCAAACATATGGTTCAATCAAAGCTCTAAGCAAACCGATCAAAATCAAAACCAAATCAAAATAATATAATTAATTATTTGCAGTTTAAAAATTAGAAATAAATGAAAATACCTATATAAGCGGCAACGGAGGCGATGACGATTACGGTTAGGGTTTGCAATCGGCAACGGAGGCGAGCACGATCTAGCTTCGTCGATGGTGACAGCAGCGGGCACAACGGGGTTCAGATGTGACGATAACGAGGGCGCTGCGGGGTTTACCTTTCGTTGGCGAGCGGCGAGTGTTGAGCGGGATTGGATTAGGTTTTCCAAATGTTGGGAGTGAATTCTTTTACACGGGAATAAAAGTTAATTAGAAAGTTCAGCGGGAAGGAAAGAAATGTTGGAGGGAACGTTGATTTTCACGTGACACTCGTTTTTTCTTTTGCACAGACTTGTTACAACTATTCAACAACTTCGGATCACAGTGGTTACAAACAAATATAACAACTGGTACCGAAAGGGCAGTTGTTCCAGATGTATATTACAACTGCCAAAAATACACAGTTGTTACAAAATGCATATTACAACTGTCCGCTTATGCCAGTTGTAAATAAAAAGTTGTAATATAGCTGTTTTGTTGTAGTGATATATATATATATATATGTACGTATGTATATATATATATATATGTAACGACCCACAATTTTCGATAATTAAAAATATTTAATTAATTAAGTTTTGGAATTTAATGTTGTGAAAAATTAAAAATTTGTGATTTATTAATAAGAAAAATAACTAGAATGAAATTTTATGATGTTAACGTAAGGTAATTGATAACTACTTTAATGCAATTTCAATTGATTGAAATGATTGTAAAGTTAAAATTGGTTATAAATTGTAAATAAGTAAATAAACCAAATGTTGTAGTAAACGGTGAAATTGTATGTAATTAATTGAAATTGGTTAATATAGAATAATCAATCAATATGTGAATTTATTAGCTTTTGTTTTATTAGCTTTTGTTGTAAACAATAAACTTGGAAATGTGTTTGAATTGGTAAGTTGTAACAATGGTCAATTATAAATTCACTATTTAATCCATTGAAATTAAATTGGGAATAAATTGCAATTAATCTAATTAATTATTGCAGATAATATGAATTAAGATGGTAACTGTAGAATATTGAGGTAATAAATGGTAAACCAATGTTAACTTTGTCCATAAAGTAATGATTGACTGAATAATAAGATTGAAATCAAAATAAAGGAATTTATATGAAATTAAATTATAATTAATTGGACTTTTATTGCAATTGAAATTGGACGCCATAATTTGTGCAACATTCAATATTGAATTTGACTTGGAAATTTACCTTAAAAGATTGTAAATCACCAGGTAATCAAAAATGATAAAATTTGTTAATTATAAAATTTAAACTGAAAAGGTGATTTAATTAATTTAATAATAATTAATTTAATTAATGTGAAATAAACATTTTGGCCACTGTCTCAGATTTTAATGAAACCAGTTTCATCGGATCCGTAACATTGAATTATTGTAGGATTTCAAGTTTCATAGCGACCGGACTTGTCATTTGATCGTGCGGGCTCGAAACGCATAGAAATCAATTTAATTGAATTCAATTGAAATAAGCTGATTTTAAAAGCTAACTTCTTCATACAATGGAATTAGGACTTAAAACCTATTCCATTGAGTTTAAAAATATCGAAATCAAATGGAATTAGGGCTTTTCGGGTTGTTGTTATCGTTTCAATCCAAATCGATATGGTCCATCCTTTTTATTTCAGCTCTGCCTATATATAGGCTGTTATAAATCCTAATTGCTTCTCATTTCTTCTTTCTATACATACTGTTACTTCTACTAGTTCCTCCTTCTCTAACGACAAAATATGAAACCCTAAATCCCAATTCAATTGCAAATAAAAATCAAATCGAAAAATTAAAACTCCTCAAACTATATCAAACTATATATCGTTGGAAAGCTCTCGACGAGTGCAATATACTACGATGATTTGCTTTTCGATTCGGATCATAGTTTGGCCAGAAATGGGTGATTCATTCTCGGTCGTTCTTTTAGGGTTTAATCATCGTCGGCGGATCGTCAATTTGAGGGTACAGGGTTGTGGAGAGTGGTGAGTGGAACGCATTTGTGTGGTTCGTTTGAAATTTTGATGGTTGAATCTACTTGATAAATTCAACTAGGGTTACCCGTCAGTGGCGGCGGCTGCGAGCTTGAGGCGGCGTTTGGTGGGGGATTTGAGTCGTTGGTGGTTGAGACGTCTTGGGGAGGTCGGCGATGGTCGCAGTTAGACGATGTGGCATGGGCGAACGCAATAAGGCGGCGGCGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	KAE9446734.1	1.2e-30	hypothetical protein C3L33_21371, partial
Swissprot	Q8VZQ2.1	1.6e-24	Myb-related protein 61
trEMBL	A0A6A4KRI8	8.7e-31	HTH myb-type domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09540.1	44.27	2e-22	101	ATMYB61;MYB61	myb domain protein 61

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G01194	AT1G09540.1	131	16	2	4	77	3	133	44.27	2e-22	101
AfisC5G01194	AT5G26660.1	132	22	2	4	78	3	134	40.15	8e-20	92.4
AfisC5G01194	AT4G01680.3	143	27	3	4	88	3	145	40.56	2e-19	91.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	15	53	29.1	7.6e-07

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0016049	P	cell growth
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009888	P	tissue development
GO:0009611	P	response to wounding
GO:0009625	P	response to insect
GO:0009651	P	response to salt stress
GO:0009682	P	induced systemic resistance
GO:0009723	P	response to ethylene
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009791	P	post-embryonic development
GO:0009800	P	cinnamic acid biosynthetic process
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0010438	P	cellular response to sulfur starvation
GO:0010439	P	regulation of glucosinolate biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030154	P	cell differentiation
GO:0042335	P	cuticle development
GO:0043565	F	sequence-specific DNA binding
GO:0044702	P	single organism reproductive process
GO:0048608	P	reproductive structure development
GO:0080091	P	regulation of raffinose metabolic process
GO:0099402	P	plant organ development
GO:1900384	P	regulation of flavonol biosynthetic process
GO:1903086	P	negative regulation of sinapate ester biosynthetic process
GO:2000652	P	regulation of secondary cell wall biogenesis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network