result

Gene information

Detail information of AfisC5G01210

Location

Gene	Chr	Start	End	Strand
AfisC5G01210	chr5	227828391	227829417	+

Sequences

CDS

Protein

Gene

>AfisC5G01210
CAAAAACAACAGTCATCAAAACCACAAACAATATTATACTAAGTATTAAAAAAAAATGCAGCAGCAGCAGCAGCATCAGTCTCCCACATTCTCTGACACATGCCAAATGAGCACGATAATATCCTCGCTCCTCCTCTCCGGCAGCGCGTCCAACGCCCTCGACGCCATTTTCTCCCACGTCCCTCCTCCGCCCCCAACCGCCACCGCTATCCCCCAACCCTCCGCTTCGATCTACGCCGTCCACACCCACCTCCTCAACTCCTCTTGCGGTCCCCAAACCCAAACCAAAAAGCTGTACCGCGGCGTGCGTCAGCGTCACTGGGGCAAGTGGGTTGCCGAGATCCGACTTCCCCAGAACCGCGTCCGCGTCTGGCTCGGCACCTACAGCTCCGCCGAGTCGGCCGCTTACGCCTACGATTGCGCTGCTTACAAGCTGCGCGGGGAGTACGCCAAGCTCAACTTCCCGCACCTCAAGAACGGCGCTGACGTGTACGATGAGGGATTGCTGAAACTGAGATCGACGGTGAATTCCAAGATTCAGGCGATTTGCCAGAGGGGAGGGAGGAAGAAGAAGAAGAACGGGATTAAAGCCGAGGTTGATTCGGTAGGTCCCACGGAAAGGACAGCTGTGCCGTCGGAGTCATCGTGTTCGTCCGTTTCTGATGGTAGTTTGATCGACGGTGAATTTTCTTTGGATAGGATGCCTTCTTTCGATCCGGAGCTGATTTGGGAACTTCTGGGTAATAAGTCAACAACCTGTTGATTGGCTGGAGTGGATAATTTAGAGTGTAATTTGCAAAGCCCCTGTTTTTTTCAATGATGGGATTTGTTTAATGTTTAAAGGAAGTTACTAGCTTTTACACTTTTTACGTTATCAGTTTACCCTTTCTGAAAGTTATTGAAATATACATCCATCTCTGTTAGAACAAATCCTTTTTTAACATGCAATTCACATTCAAAGACTCGAATGGGAAAGGAAGAAATTGGAATATAGATATACGTATCAGATTTTAAGGTGTAAACAGCG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020685544.1	4.0e-44	ethylene-responsive transcription factor ERF061
Swissprot	Q9C7W2.1	1.0e-36	Ethylene-responsive transcription factor ERF061
trEMBL	A0A2I0W6Y1	2.9e-44	Ethylene-responsive transcription factor ERF061

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G78080.1	43.16	1e-31	133	AtWIND1;RAP2.4;WIND1	related to AP2 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G01210	AT1G78080.1	190	71	8	72	226	143	330	43.16	1e-31	133
AfisC5G01210	AT4G13620.1	169	63	6	75	228	226	382	46.75	5e-31	131
AfisC5G01210	AT4G39780.1	91	31	1	78	166	90	180	63.74	5e-31	130

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	81	130	46.5	2.8e-12

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009409	P	response to cold
GO:0009611	P	response to wounding
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009873	P	ethylene-activated signaling pathway
GO:0010017	P	red or far-red light signaling pathway
GO:0010200	P	response to chitin
GO:0034059	P	response to anoxia
GO:0043565	F	sequence-specific DNA binding
GO:0045595	P	regulation of cell differentiation
GO:0071472	P	cellular response to salt stress
GO:2000070	P	regulation of response to water deprivation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network