result

Gene information

Detail information of AfisC5G01251

Location

Gene	Chr	Start	End	Strand
AfisC5G01251	chr5	234207254	234211007	+

Sequences

CDS

>AfisC5G01251
ATGAAAAGTATGAGTTATTCCCAGATTTCAAACTCCTTTTTCATCATTTTAATCACATTCCTCTTCATACTAACCCCAAAAATCAGTTCACAAAACCTTTCTCCTTCTCAAATCAAGACTCTTTTTCGCGTTCAACATATTCTCGAATATCCATCATCTCTTTCTGCTTTAAACAACGCTACTAATTTCTGCTACTTGCCATATACTCCATCTCTTTCCATTTCTTGTTCTGGAACAGAAATCATCGAACTCAGTATCAGCGACTACATTTCTACTCCATTATCAAAATCATTTTCAGCCGATTCATTATTCACCACTCTTTCAAGGCTGCCAAGCTTAGAGTCTCTTTCTCTTGTTTCTCTTGGTATTTGGGGCCCGCTGTCCTCAAAGGTAGATCGCTTTTCAGCGCTAAAGGTTCTTAATCTAAGCACTAATCACTTTTATGGAGGGTTACCAAGTGAGATTTCTTCAATGAGTACTCTTCAAAATGTTATTTTAAGCGGAAATGCTTTTAATGGGAGCATCCCTAATCTGAAAAGTTTGTCAGCTCTTAAAGAACTTGACTTGAGAAATAATCATTTTAGTGGTAATGTACCACTTGGTTATGCTTCCTTTGGCAAGCTTGTTAAGTTAGACTTATCGATGAATCGACTTAATGGAAATATTCCTTCTTTTTTGTTTGCTTTACCATCAATTCAGTACTTAAACTTGTCAAGAAATGGGTTCAGTGGAGCGCTTTCTACAAACAAAAAACTATCTTGTGGGAAGAAGCTTGAACTTGTAGATATTTCAAGTAATCTTATAGTTGGAAACTTGCCTGGTTGTATGAATTCTAATTCATCGTCTCGGGTTGTGTTGAATTCTTGGAATTGTTTGGATGTTAAAGATTTGAAATACCAGCACCCTACTTCTTATTGCATTAGAAAACCAATAGCTGCAGTGTTACCACCTTTAGTAAAAGATAAGAAGCCTAAAACAAATTTTGGCTTAGTGTTGGTCATTGCTGGAGCTGTGATTGGTAGTGTTGCAATCGTATCTTTATTGTTGTTTTTGGTATTCAAGAAAGCAAGATCAAGGAGTGTAGAAATGATCAAATTACCAAAACATGCTGCAAAATCATCTATTCAGATCTCTCCAAAGAAAGCAATTGATACAAGGCACATGTCTCAAGCAGTGAGAATAGGAACACATGGACTTACTCCTTACAGAGTTTTTACCATTGAAGAGCTTGAAGAAGCTACAAACGGATTTGATTCGTCAAATTTGATTTCAGATGGTCCAAGAGGACAGTTCTATAATGGAAGGCTTCAAAATGGTTCAGCAGTTGTTGTGAGATGTTTGAAGCTAAAACGAAAGCTCTCATCTCAGACACTTACCCCATACATGGATAAAGTTTCTAAACTAAGACATGTCAACTTAGTTAGCATTCTTGGACATTGCATTCCTATAAATGAAGACAACTCTATCACAAATGTCTACCTCATCTTCGAGCATGTTTCAAATGGATCACTAAGGACTCACCTAACTGAGTGGAGAAAGCGTGAAATGTTGAAATGGCCACAGAGAGTAGCAGCTGTTATTGGAACTGCAAAGGGAATTCAGTTCTTGCATACAGTGACGGTGCCTGGGATATTTGGCAACGATCTTAACACTGAAAATGTTATGCTAGATGAAACTCTGAATGCAAAAATCAGCAATTATAATCTACCCATCATGTCAAAAAATAAGAGCAGTAAGGCTGGTTCAGAGAGCTCTTTTAGATCACTGGATGATGTCGATCATGAACATAGTATTCCCAGTTTGGAACTTCGTGAAAAGGAAGATGTTTATCAGATCGGCCTTATACTTGTTGAAATATTCACTGGCAAACAAGCAGGTTCTGGTTATGAACTGGAGAAGCTGAAACTGGAGGATTGTCTAGGTGAAGGGCCTGCAAAATTAGCATTAATAACAGATCCAGCAATCCACGGCACATATGCAATCAAATCTCTGCAGACTTTAATTGATGTTGCACTGAAGTGTCTAGATAAAATTCCCAATGACAGACCCTCCATAGACGACATCCTTTGGAATTTGCAATACTCTGTTCAAGTTCAAGATGGTTGGACTAGCAGCTGA

Protein

Gene

>AfisC5G01251
TTTGGGTACTGTATGCAGGAAAACTTAAGCAGTGAATTTTAGCTATTATACCGTAGATGCTCCGTCCAGAAAGACCACTTTTTGTGCCTTTCTTCAATAAAATAAAAAGTTATATAATAGCTCCCTGTACAAAATCACTGTAGGCCATCATCACTGCACTTCAGCATTTTCCTTCCATAAAGATCCAATCCTTGCATAATAAACGAAAGCAAATCCCTCCCCATCATCATATTCATGAAAAGTATGAGTTATTCCCAGATTTCAAACTCCTTTTTCATCATTTTAATCACATTCCTCTTCATACTAACCCCAAAAATCAGTTCACAAAACCTTTCTCCTTCTCAAATCAAGACTCTTTTTCGCGTTCAACATATTCTCGAATATCCATCATCTCTTTCTGCTTTAAACAACGCTACTAATTTCTGCTACTTGCCATATACTCCATCTCTTTCCATTTCTTGTTCTGGAACAGAAATCATCGAACTCAGTATCAGCGACTACATTTCTACTCCATTATCAAAATCATTTTCAGCCGATTCATTATTCACCACTCTTTCAAGGCTGCCAAGCTTAGAGTCTCTTTCTCTTGTTTCTCTTGGTATTTGGGGCCCGCTGTCCTCAAAGGTAGATCGCTTTTCAGCGCTAAAGGTTCTTAATCTAAGCACTAATCACTTTTATGGAGGGTTACCAAGTGAGATTTCTTCAATGAGTACTCTTCAAAATGTTATTTTAAGCGGAAATGCTTTTAATGGGAGCATCCCTAATCTGAAAAGTTTGTCAGCTCTTAAAGAACTTGACTTGAGAAATAATCATTTTAGTGGTAATGTACCACTTGGTTATGCTTCCTTTGGCAAGCTTGTTAAGTTAGACTTATCGATGAATCGACTTAATGGAAATATTCCTTCTTTTTTGTTTGCTTTACCATCAATTCAGTACTTAAACTTGTCAAGAAATGGGTTCAGTGGAGCGCTTTCTACAAACAAAAAACTATCTTGTGGGAAGAAGCTTGAACTTGTAGATATTTCAAGTAATCTTATAGTTGGAAACTTGCCTGGTTGTATGAATTCTAATTCATCGTCTCGGGTTGTGTTGAATTCTTGGAATTGTTTGGATGTTAAAGATTTGAAATACCAGCACCCTACTTCTTATTGCATTAGAAAACCAATAGCTGCAGTGTTACCACCTTTAGTAAAAGATAAGAAGCCTAAAACAAATTTTGGCTTAGTGTTGGTCATTGCTGGAGCTGTGATTGGTAGTGTTGCAATCGTATCTTTATTGTTGTTTTTGGTATTCAAGAAAGCAAGATCAAGGAGTGTAGAAATGATCAAATTACCAAAACATGCTGCAAAATCATCTATTCAGATCTCTCCAAAGAAAGCAATTGATACAAGTGAGGGGGAATTTAGTGATGCTAGTCATGGAATTTTGGTAAATGAATCGTTGAGTACTGAAATTTTGTTTATTTATGTAGGGCACATGTCTCAAGCAGTGAGAATAGGAACACATGGACTTACTCCTTACAGAGTTTTTACCATTGAAGAGCTTGAAGAAGCTACAAACGGATTTGATTCGTCAAATTTGATTTCAGATGGTCCAAGAGGACAGGTACTTGTATAACTTCATTTGATGCATGTCCAGGCATTTATGCCTTTTGTTTTACTTATATAAATTTTTACCCTACGTTTTGAAGCTTTTTTAACAACACTTTGAAATTACTTTTCTACTCAATTTTTTAGCTGAAGTTATAATCTAACAAATAGTACATAAACGCATTATTTAAGCTTTTAATTTTGTGCTCCCAACATAACCTTTGAACTTAACATATATGAAAATATATTTGTTCTAAAATAAATCAATATTTCTATGTTACAAACCCATCGAAAGTATATCTTCAAGTGCAATACACATACATAAGATTTGTATAATTTAATTCATGTTTCAAAAATAACAGTTCTATAATGGAAGGCTTCAAAATGGTTCAGCAGTTGTTGTGAGATGTTTGAAGCTAAAACGAAAGCTCTCATCTCAGACACTTACCCCATACATGGATAAAGTTTCTAAACTAAGACATGTCAACTTAGTTAGCATTCTTGGACATTGCATTCCTATAAATGAAGACAACTCTATCACAAATGTCTACCTCATCTTCGAGCATGTTTCAAATGGATCACTAAGGACTCACCTAACTGGTATGTATGTATGACATTTTCCTTTTTCATATATATATGATATATGATATCTTAGCAATATTTTCTACTTTTGAACTCCCAAACATACAATATAATGCTATATACTTTTGAGCAAGCATTAATCTACTGATAGTCTATAAGACCCTAATGGGTTAGCTCATCTGATCATAAAGTGAGATGTCAAATGAGAGGTATAGGAGTAAATTTTTATGTTAACCATGTAAATCCGTCTGAAAACGTTTGAAGTAGTCTAAAGTATCTGTTGCGGTATCACTGCATACTAACTTAGAATGTTAACGGATAGTATTTGGTTTATTGGGTTTGAAGAAAAAAAAAAGTTGATACTTTGTAGGTGATCGTAGGTGGAATGTATAAGCTTTTACCTTTTTTTCCCCTTTGATTTGGCAGAGTGGAGAAAGCGTGAAATGTTGAAATGGCCACAGAGAGTAGCAGCTGTTATTGGAACTGCAAAGGGAATTCAGTTCTTGCATACAGTGACGGTGCCTGGGATATTTGGCAACGATCTTAACACTGAAAATGTTATGCTAGATGAAACTCTGAATGCAAAAATCAGCAATTATAATCTACCCATCATGTCAAAAAATAAGAGCAGTAAGGTAACTACACATTGAACATATGTCACCAGACATTAGCTTTTCCATCTAACTATATTGATTTTTAACTATACCAGGCTGGTTCAGAGAGCTCTTTTAGATCACTGGATGATGTCGATCATGAACAGTAATTTTTTTCTTTTCAACATGCTCGAAGAGATATTGTTTTGCTTGCGGTGTTGGGATATTTAACTAGAGTTCTTATTCTTTTTTATGAACAGTAGTATTCCCAGTTTGGAACTTCGTGAAAAGGAAGATGTTTATCAGATCGGCCTTATACTTGTTGAAATATTCACTGGCAAACAAGCAGGTTCTGGTTATGAACTGGAGAAGCTGAAACTGGAGGTGTGCTTTTATTCTTCAAAATATTGATTACATGCTATATAAAGTTTTTCACATATATTAGTATGATTTGAAAACCATACAAACTCATCTTACACAAGGTTAACGATTGCTTGTGCACTGTTTTGCATGCTATCAACTGATACATATATGATCATTATTTGTTAATCAAAGATATCATATTTCATAATAAACACTGAATAAAATGGGAAGTGTGTTGGTAATATGCAGTTGCAGGATTGTCTAGGTGAAGGGCCTGCAAAATTAGCATTAATAACAGATCCAGCAATCCACGGCACATATGCAATCAAATCTCTGCAGACTTTAATTGATGTTGCACTGAAGTGTCTAGATAAAATTCCCAATGACAGACCCTCCATAGACGACATCCTTTGGAATTTGCAATACTCTGTTCAAGTTCAAGATGGTTGGACTAGCAGCTGATATTCTCATTTTTGTCAATATTATTATTTGGTTTGATTTGTTTTTGCGACTGAGTTGTTATGTAAATGATAGTTGTTCATATATGTAAAATATTTGATTATCATTGGAAGTCTTTGCAGAAACATCTAAATGTTACCCAAGCAATGGTATTATATTATTTGGGCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250614.1	4.6e-176	probable LRR receptor-like serine/threonine-protein kinase At1g14390
Swissprot	Q9M9S4.1	8.9e-92	Probable LRR receptor-like serine/threonine-protein kinase At1g14390
trEMBL	A0A5P1EKL9	2.5e-152	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G14390.1	41.60	5e-149	525		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G01251	AT1G14390.1	726	368	14	26	705	22	737	41.60	5e-149	525
AfisC5G01251	AT2G02780.1	727	353	19	29	705	25	729	41.54	5e-129	458
AfisC5G01251	AT3G03770.2	731	376	14	50	702	43	758	35.84	1e-123	440

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	422	689	74.1	9.4e-21

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001558	P	regulation of cell growth
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0009741	P	response to brassinosteroid
GO:0009755	P	hormone-mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009856	P	pollination
GO:0044425	C	membrane part
GO:0044444	C	cytoplasmic part
GO:0044702	P	single organism reproductive process
GO:0048364	P	root development
GO:0048468	P	cell development
GO:0071396	P	cellular response to lipid
GO:1901701	P	cellular response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network