result

Gene information

Detail information of AfisC5G01671

Location

Gene	Chr	Start	End	Strand
AfisC5G01671	chr5	318630507	318633669	-

Sequences

CDS

Protein

Gene

>AfisC5G01671
ATGTATTTTCACCGCGAACCCCTTTTGACACTGTTTCTTCTCTTCTCCTACAATTCATTCATTCTCTTCACATTCTCTCAAAATGAAGAAACAATTTCAGCTCTTCTCACCTTCAGAAACTCAATTGAACAAGACCCATCAAACTGCTTCTCAAATTGGAACATAACTTCAAATCCAAACCCATGTTCATGGAATGGCATTATATGTAAATACTCAAAAGTCATTTCTTTAAGCATTCCAAAAGCTAATTTATATGGCTCTCTTTCTTCTTCAATCTTTTCTCTTCCTTCACTTAGGCATATAAACTTAAGAAGCAACCGGTTATATGGCTCTCTTCCCTTTTCAATTTCCAGCTCATTTGCACTGCAAAGTTTGGTTCTTTATGGAAATTCATTACATGGACCAATTCCTTTTGACATTGGTAAGCTTTCTTACCTTCAAATTTTGGATCTTTCTGATAATTTACTCAATGGGTCTTTGCCAAGTTCTTTAATTTTATGTAGTAGACTGAAAATACTTGATTTGAGTCATAATAACTTAAGTAATTCACTCCCTGTTGGTTTTGGAAGCAGTTTGGTTCATTTGGAAAAGCTTGATCTTTCTTATAACATATTCAATGGTCCAATTCCTGGAGATATTGGTAATATGTCAAATCTTCAGGGGACTGTAGATTTTTCACATAATTTGTTTTCGGGTTCAATCCCAAGTAGTCTAGGGTCTTTGCCAGAGAAAGTGTATATTGATCTTAGCTATAATAATCTTAGTGGTGCAATACCTCAAAATGGAGCTTTAGAAAATCGAGGTCCTACTGCTTTTGTTGGCAATCCTTATCTTTGTGGATCGCCATTAAGAAATCCTTGTTCTATAGCGAGCAATTCAAACACATCTTCAAGCAATAATACTGTTGTTAGTAGCAATGGCAGCAATAAAGGGCTTAGAAGAAGTGTAATTGTTGCAGTTGTAGTAAGTGATGTGATTGGAATTGCTTTGATTGCATTAATATTCTTTTGTTGTTACAAAAGAGCAATTAGTGATGAAGTACCTAAGAACAAAAGCCGATTCATTTGCTTTAGAAATGTAGAATCTGAAGGTTTTTCAGAAATTGTAGAGCAAAATGAGCTTGTTCCGTTAGATAAACACGTTAGTTTTGACTTAGACGAGTTGCTAAAAGCTTCGGCCTTTGTATTGGGAAAGAGTGGAACAGGAATTGTTTATAAGGTCGTGTTAGAAAATGGACCAATGTTGGCTGTTAGAAGACTGGGAGAAGGTGGAGTGCAGAGATTTAAAGAGTTTGTAAGCGAAGTCAAAGCTATTGGCAAAGTTAGGCATCAGAATATTGTTACATTGAGAGCTTATTATTGGTCGATAGATGAAAAGTTGTTGATTTACGATTTCATTCCAAATGGCAATCTATCTTCTGTGCTCCATGGTTAGTGATTTTATCTTTGATCGTTTTCAGCCATTACATTGAATAAATGTTCGTACAACATGTTCAAATTCTATATACCTATGTGCCCTTAAAATTTTATCTATACATTATTAGCAATTTCTACCATTTTACTAGATTAAAGGTAAATGGAAGACAATATAATTTGTACACCAGGGCATGCAGTACGAAAACAGTTGTAAAAACTTACACACTAGTTATATATACTGTACACATGAATGTGCATACATACATATGAAATTAATCCTGGTCATACATTATATGCACTGCACATACGATACACAACACACGCACATGTATGTATGTATGTATGTGTATGTGTATGTGTATGTATGTATATATGTGTTAAGGTAATGATACATGATAAAGCATTGAAAATGTAAAATGAGTAAGCTAATTAACTTACTTTTTACAAACAAACATGTGAATTTATTTTTGGTTAATTATTTTTGGCCATTATATAACGAAGTTCATATCTAGTGTCCAAATTCCATCTACCTTTGTGCTCTTCTGATTTCATTCATTCATTATTAGTAATCCCTACCATTTTACTTGGTTAAAAGTAAAAGGGTTACAATTTAGTATATGACGAAAATTGTGTAAACTTACATACTTGTTGTACACACTTTGTGCATACAAACACATGAAATTAATGCTTGCCATACATGTACGCGCACACACACATATATCATACAAAAACCGGTTTTCTTAATACCTGAGTAAATTGATTGTTCGTAGACTCCTAAGAAATGTGCACCAACTCCATAACAGATACTACTATTTTTTGTGCGTGCGTACTTGTGCATGATAAAAATGCATTTACATGTCAGGTGATGGTAGCTCATTTCAACCTCTACCATGGGAAACACGACTAAAAATAATGAAAGGAGTAGCAAAAGGTTTATGTCACTTGCATGAAGCTAGTCCCAAGAAGTACATTCATGGAAACCTCAAACCTAGCAATATTCTCCTTGACCAAAAAATGCAACCATATATTTCGGATTTTGGCGCCAATCACTTAGCCAACATCGCTGCATCTCCGCTTATCCAATCAAGTAGGACCGATGCCACATTGAGTCCAGTTGTTGATATAGCATTGTGCTACCAAGCTCCTGAAGCATTGAAAACACTTAAGCCTTCACAAAAATGGGATGTTTATTCATATGGAGTTATTTTATTGGAATTAATATCTGGAAAGTCTCCAATAATATTGATGGAAACTTGCGAAATGGATCTGGTACGTTGGATTCAGTTTTGTATTGAAGAGAAGAAACCACTATTTGATGTATTGGATCCATTCTTATCTGATGAGTTAGAAAGCAAGGAAGATGAGATTATAATGGTGCTTAAAATTGCTTTGGCTTGTGTGCAAGCTAATCCAGAAAGGAGACCAACGATGAAAAATATCTCTGAGACTTTGGATAGGCTAATGACTGCAAGGTAATAATGCAGTGTAAGTTTCCCTCTTCTTCCTAGTATCTTGGAGTTAATCGCTTTGTGCAGTTTATGTAAGATTGATTTGTGTTGTATTGCATATGTAGTTCTTGTAAGTAGTGCACCTTATGAATGAAGCTAATTTTGTTTTAACACAAACAGCATTTTAATTACACGTATGTCAGTAATGATGAAATCACAAGCTTGCATATTGATATTGATGTGTACATGCAAAAGACAAATACACAAGAGCTGTAAGTTTGACAAATATGTAGAGTACAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267190.1	5.4e-174	receptor protein kinase-like protein ZAR1
Swissprot	Q9ZU46.1	1.6e-146	Protein ZYGOTIC ARREST 1
trEMBL	A0A5P1EVN4	3.9e-174	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G01210.1	58.55	0.0	781		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G01671	AT2G01210.1	690	240	8	34	679	27	714	58.55	0.0	781
AfisC5G01671	AT1G25320.1	672	267	11	34	676	29	699	55.80	0.0	713
AfisC5G01671	AT1G66830.1	696	332	13	9	679	4	684	46.55	2e-168	589

Ortholog group

Species	Genes
Allium cepa	g224533.t1
Allium fistulosum	AfisC5G01671
Allium sativum	Asa0G00444.1
Arabidopsis thaliana	AT2G01210.1
Oryza sativa	LOC_Os01g33090.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	33	69	36.6	3.7e-09
PF12799.4	LRR_4	Repeat	169	210	27.2	3.1e-06
PF00069.22	Pkinase	Domain	396	670	107.5	6.6e-31

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0022625	C	cytosolic large ribosomal subunit
GO:0005515	F	protein binding
GO:0003729	F	mRNA binding
GO:0004674	F	protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009570	C	chloroplast stroma
GO:0009620	P	response to fungus
GO:0010069	P	zygote asymmetric cytokinesis in embryo sac
GO:0031224	C	intrinsic component of membrane
GO:0046777	P	protein autophosphorylation
GO:0071840	P	cellular component organization or biogenesis
GO:0090406	C	pollen tube
GO:2000605	P	positive regulation of secondary growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network