Detail information of AfisC5G01916


Location
GeneChrStartEndStrand
AfisC5G01916chr5360627119360630071+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020261610.14.8e-27DNA-binding protein MNB1B-like
SwissprotP40619.11.5e-17HMG1/2-like protein
trEMBLA0A5P1F2B92.2e-26GS catalytic domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G53180.161.635e-25 110NodGSglutamate-ammonia ligases;catalytics;glutamate-ammonia ligases

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00505.16HMG_boxDomain368144.11.9e-11
PF00120.21Gln-synt_CDomain10217964.47.8e-18

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000785Cchromatin
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006333Pchromatin assembly or disassembly
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0006542Pglutamine biosynthetic process
GO:0030527Fstructural constituent of chromatin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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