Detail information of AfisC5G02022


Location
GeneChrStartEndStrand
AfisC5G02022chr5382039062382065330+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020270404.10.0e+00histone-lysine N-methyltransferase ATXR3-like isoform X1
SwissprotO23372.20.0e+00Trithorax-related protein 3
trEMBLA0A5P1EIZ20.0e+00SET domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G15180.148.980.01805ATXR3;SDG2SET domain protein 2

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Ortholog group
SpeciesGenes
Allium cepag383780.t1; g67191.t1
Allium fistulosumAfisC5G02022
Allium sativumAsa4G05660.1
Arabidopsis thalianaAT4G15180.1
Oryza sativaLOC_Os08g08210.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF14237.3DUF4339Family964100732.55e-08
PF00856.25SETFamily1787184643.15e-11

Gene Ontology
AccessionOntologyName
GO:0005488Fbinding
GO:0005634Cnucleus
GO:0006351Ptranscription, DNA-templated
GO:0009605Presponse to external stimulus
GO:0010452Phistone H3-K36 methylation
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0031323Pregulation of cellular metabolic process
GO:0044699Psingle-organism process
GO:0060255Pregulation of macromolecule metabolic process
GO:0080090Pregulation of primary metabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K22748ATXR3, SDG2; [histone H3]-lysine4 N-trimethyltransferase ATXR3EC:2.1.1.354 Lysine degradationko00310

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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