Detail information of AfisC5G02069


Location
GeneChrStartEndStrand
AfisC5G02069chr5390992094390996613+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020269973.19.9e-19transcription factor TCP12-like
SwissprotQ9FYG7.11.7e-15Transcription factor TCP1
trEMBLA0A5P1ERD47.2e-19TCP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G67260.157.535e-1888.2TCP1TCP family transcription factor

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag267711.t1; g483212.t1
Allium fistulosumAfisC5G02069
Allium sativumAsa8G03284.1; Asa8G03286.1; Asa8G03288.1; Asa8G03289.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03634.10TCPFamily59118100.51.2e-28

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009637Presponse to blue light
GO:0009733Presponse to auxin
GO:0009793Pembryo development ending in seed dormancy
GO:0009908Pflower development
GO:0009965Pleaf morphogenesis
GO:0030154Pcell differentiation
GO:0045962Ppositive regulation of development, heterochronic
GO:0048262Pdetermination of dorsal/ventral asymmetry
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000032Pregulation of secondary shoot formation
GO:2000306Ppositive regulation of photomorphogenesis

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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