Detail information of AfisC5G02135


Location
GeneChrStartEndStrand
AfisC5G02135chr5401755390401766301+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRRT84671.11.7e-220hypothetical protein B296_00009304
SwissprotP43298.14.5e-181Transmembrane kinase 1
trEMBLA0A427B8721.3e-220Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G66150.151.430.0 832TMK1transmembrane kinase 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag6693.t1
Allium fistulosumAfisC5G02135
Allium sativumAsa6G05919.1; Asa6G05921.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08263.9LRRNT_2Family266018.00.0024
PF00560.30LRR_1Repeat2562779.61.4
PF08263.9LRRNT_2Family32735912.40.13
PF12799.4LRR_4Repeat38742529.27.4e-07
PF00069.22PkinaseDomain568841170.83.2e-50

Gene Ontology
AccessionOntologyName
GO:0004675Ftransmembrane receptor protein serine/threonine kinase activity
GO:0046658Canchored component of plasma membrane
GO:0005794CGolgi apparatus
GO:0009505Cplant-type cell wall
GO:0009506Cplasmodesma
GO:0009555Ppollen development
GO:0009941Cchloroplast envelope
GO:0019901Fprotein kinase binding
GO:0035420PMAPK cascade involved in innate immune response
GO:0071323Pcellular response to chitin
GO:1900150Pregulation of defense response to fungus
GO:1900426Ppositive regulation of defense response to bacterium

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K00924E2.7.1.-; kinaseEC:2.7.1.- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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