Detail information of AfisC5G02154
| Gene | Chr | Start | End | Strand |
|---|
| AfisC5G02154 | chr5 | 406616393 | 406639158 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020267781.1 | 7.3e-123 | E3 ubiquitin-protein ligase makorin |
| Swissprot | Q5ZA07.1 | 1.9e-120 | Zinc finger CCCH domain-containing protein 41 |
| trEMBL | A0A5P1EWN1 | 5.2e-123 | RING-type E3 ubiquitin transferase |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT3G08505.1 | 63.14 | 2e-117 | 419 | | zinc finger (CCCH-type/C3HC4-type RING finger) family protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC5G02154 | AT3G08505.1 | 331 | 100 | 4 | 8 | 335 | 2 | 313 | 63.14 | 2e-117 | 419 |
| AfisC5G02154 | AT3G08505.2 | 331 | 100 | 4 | 8 | 335 | 2 | 313 | 63.14 | 2e-117 | 419 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00642.21 | zf-CCCH | Family | 40 | 60 | 28.3 | 1e-06 |
| PF00097.22 | zf-C3HC4 | Domain | 192 | 249 | 31.0 | 1.6e-07 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K15687 | MKRN; E3 ubiquitin-protein ligase makorin | EC:2.3.2.27 | - | - |