result

Gene information

Detail information of AfisC5G02253

Location

Gene	Chr	Start	End	Strand
AfisC5G02253	chr5	426916047	426917760	+

Sequences

CDS

>AfisC5G02253
ATGTCCTCCTCCCTCATCACCCGAAGCTCCACCTCCTCCCCCACCACCACCAACCCCAACCTCCTCCTCGGCCGCTACGAACTCGGCAAACTCCTCGGCCACGGCACTTTCGCCAAAGTCTACCTTGCCCGCAACCCTTCCACCAACGAGAGCTTCGCCATTAAAGTCCTCGACAAGGAGAAAATCCTCAAATCCAACCTCGTCGCCCACACCAAACGCGAAATCTCAATCCTCCGCCGCGTCCGCCACCCAAACATCGTCCAGCTCCACGAGGTCATGGCCACCAAATCCAAAATCTACTTCGTCATGGAGTACGTCCGCGGCGGCGAACTCTTCCAGAAGGTCGCCAAAGGCCGATTGAAAGAAGACGTCGGCCGCCGCTACTTCCAGCAGCTCATCTCCGCCGTCGAATTCTGCCACGCGAGAGGCGTTTACCACCGCGATCTGAAGCCGGAAAACCTATTGCTCGACGAAAACGGCGATCTGAAAGTCTCCGACTTCGGGTTGAGCGCCGTCTCCGATCAGATGAGGCAGGACGGACTGTTCCACACCTTCTGCGGCACTCCTGCTTACGTGGCACCGGAGGTGCTCGGTAGAAAGGGATACGACGGCGCTGCTTATGATGTTTGGTCTTGCGGTGTTATCCTCTTTGTGTTGATGGCAGGTTATTTGCCCTTTCATGACCAAAATGTGATGTCTATGTACAGAAAGATTTACAAAGGTGAGTTCAGATGTCCGAGATGGTTTTCAGGCGATCTGGTTAAGCTTTTGAGTAAGATGTTGGATACCAATCCGAGGACTAGGATTACAATCAAGGAGATTATGGAAGATAAATGGTTCAAAAAGGGCTTCAAACGTATCAATTTCTACATTGAAAATGATAGGTTTTGCTATAAGAGAGATGATGATGTTGACAATGAAGAGGATGACGCAGCACATTCAGATGAAAATGAGAATGAAACAGATGCAGAGGAGTCGGGAAATGAGTCTGATTCTTCGGTAGCATCATGTCCTGCTACGATTTCAAGTGGAAGGAGGAAAGGATTGGGGAACTTGCCCAGGCCATCTAGTTTGAATGCATTTGATATTATATCATTTTCTAGAGGATTTGATATATCGGGGCTTTTTGAAGAGAGAGGAGAAGAGACGAGGTTTGTCTCTGGAGAGCCTGTATCGACTATTATATCGAAACTGGAGGACATTGCTAAGGATGTAAGTTTCTCTGTGAGGAAGAAGGATTGTAGAGTGAGTTTGGAAGGAACAAGAGAAGGGGAGAAAGGACCGCTGACGATTGGAGCTGAGATATTCGAGCTTACACCTTCTCTTGTGGTGGTTGAAGTTAAGAAGAAGGCCGGAGATAATGGAGAATATGAAGAGTTTTGTAACAAGGAGCTGAAGCCTGGCTTGAGAACTCTTATGTACCCAGCTGCATTACATTCAGAGGTTGCTTCTGAAGCTAAGTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263935.1	2.6e-215	LOW QUALITY PROTEIN: CBL-interacting serine/threonine-protein kinase 12-like
Swissprot	Q9SN43.1	9.8e-191	SOS2-like protein kinase PKS8
trEMBL	A0A6I9RD28	2.5e-199	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G18700.1	71.58	0.0	701	ATWL4;CIPK12;PKS8;SnRK3.9;WL4	CBL-interacting protein kinase 12

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC5G02253	AT4G18700.1	482	119	4	6	486	5	469	71.58	701
AfisC5G02253	AT5G45810.1	461	112	6	16	472	18	460	70.93	664
AfisC5G02253	AT1G29230.1	481	126	4	6	485	54	510	68.61	645

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	26	280	252.7	3.4e-75
PF03822.11	NAF	Domain	355	411	83.5	7.5e-24

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0004553	F	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005986	P	sucrose biosynthetic process
GO:0006979	P	response to oxidative stress
GO:0007275	P	multicellular organism development
GO:0009414	P	response to water deprivation
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0019593	P	mannitol biosynthetic process
GO:0042538	P	hyperosmotic salinity response
GO:0047274	F	galactinol-sucrose galactosyltransferase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07198	PRKAA, AMPK; 5'-AMP-activated protein kinase, catalytic alpha subunit	EC:2.7.11.11	Apelin signaling pathway	ko04371
			FoxO signaling pathway	ko04068
			PI3K-Akt signaling pathway	ko04151
			AMPK signaling pathway	ko04152
			mTOR signaling pathway	ko04150
			Autophagy - animal	ko04140
			Tight junction	ko04530
			Insulin signaling pathway	ko04910
			Glucagon signaling pathway	ko04922
			Adipocytokine signaling pathway	ko04920
			Oxytocin signaling pathway	ko04921
			Axon regeneration	ko04361
			Longevity regulating pathway	ko04211
			Longevity regulating pathway - multiple species	ko04213
			Circadian rhythm	ko04710
			Thermogenesis	ko04714
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network