Detail information of AfisC5G02534


Location
GeneChrStartEndStrand
AfisC5G02534chr5482505684482523493+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRDX97598.17.5e-34Myb-related protein 306, partial
SwissprotQ9SN78.11.7e-35Myb-related protein 94
trEMBLA0A371H4465.4e-34Myb-related protein 306 (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G47600.176.834e-37 149ATMYB94;ATMYBCP70;MYB94myb domain protein 94

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain146158.93.6e-16

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135Ftranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0016049Pcell growth
GO:0001666Presponse to hypoxia
GO:0005634Cnucleus
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0009411Presponse to UV
GO:0009414Presponse to water deprivation
GO:0009611Presponse to wounding
GO:0009626Pplant-type hypersensitive response
GO:0009651Presponse to salt stress
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0009809Plignin biosynthetic process
GO:0009866Pinduced systemic resistance, ethylene mediated signaling pathway
GO:0009909Pregulation of flower development
GO:0010091Ptrichome branching
GO:0010118Pstomatal movement
GO:0010200Presponse to chitin
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0046686Presponse to cadmium ion
GO:0042335Pcuticle development
GO:0042761Pvery long-chain fatty acid biosynthetic process
GO:0043565Fsequence-specific DNA binding
GO:0071281Pcellular response to iron ion
GO:0071732Pcellular response to nitric oxide
GO:0080091Pregulation of raffinose metabolic process
GO:0080167Presponse to karrikin
GO:2000652Pregulation of secondary cell wall biogenesis

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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