result

Gene information

Detail information of AfisC5G02635

Location

Gene	Chr	Start	End	Strand
AfisC5G02635	chr5	497722785	497725795	+

Sequences

CDS

>AfisC5G02635
ATGGTCATTTGTTTTGAACTTGATTCTTGGATTTGGCAGAATTTCTTATTCATGGGAAATTTATGTGGGAGAACTACTAAATGTGCAAGTGCTTCCTCTCCTTACGCTTCAAAGAAAGGTATGCTAGATGGTGGTTCCAATGGGTCAAGTAAATCATTCACATTATCTAAAACTACAAACAGTCAATACTCATTTGGAAGTGAAACATCATTGCAAAAGTTGAAGTGCTTTAGTTTGAATGATCTGAAAGTAGCTACTAGAAACTTCCGACCAGACTCTTTTCTAGGAGAAGGAGGCTTTGGGTGTGTGTTTAAAGGGTGGATTGATGAGAAAACATTGGCTCCTGTCAAACCTGGAACTGGCATGGTGGTTGCTATCAAGAAACTAAAAAGAGAGAGCTTTCAAGGACATAAGGAATGGCTTGCAGAAGTAACGTTCCTAGGCCAGCTCCGGCATAATAATTTAGTGAAGCTAATTGGCTACTGCTGTGAACCTGAAAACAAACTTCTAGTTTATGAATTTGTACCGCGGGGGAGTTTAGAGAATCATTTATTTAAGAGAAAAGGTGAGCCCATTTCATGGACTATGCGCGTAAATATTGCCATTGATGTTGCAAAAGGGCTATCATTCCTTCACAGTCAACCAACTCCAGTAATATACCGGGATATGAAGGCATCAAATATACTTCTAGCCTCGGATTTCAAAGCAAAGCTTTCTGATTTTGGCTTGGCTAGAAATGGTCCAACTGGGGATAAAACTCATGTATCAACTAAGGTTGTCGGAACTCGTGGCTATGCCGCTCCTGAGTATATTGCCACAGGTCACTTAAGCACATCGAGCGACGTATACAGCTTCGGAGTTGTATTATTAGAACTTTTATGTGGAAGGAGAGCATTAGATGAAAACAGACTTAGTGTAGAAGAAATATTAGTAGATTGGGCGATACCTTTCTTAACTAGTAGAAAGAAAATGCTGAGGATAGTGGATACAAGATTAGAAGGGCAATACTCAAAGAAAGAAGTTCAAGGAATTGCTGCCCTTGCCTTGCATTGCCTTGACATTGATCCCAAAAACCGACCAAATATGAATGAAGTTCTTTCCACACTGCAACAACTTCAGACATCAAGCAATGCCATTATTTCAACAAAAATAGATCAAAATGTCTCCTAA

Protein

Gene

>AfisC5G02635
ATTATTGCAGCAACTCATAATACAAATGTATATATTTATTCTTTTTTGATATATAACCATTGAAATTGATGGTCATTTGTTTTGAACTTGATTCTTGGATTTGGCAGAATTTCTTATTCATGGGAAATTTATGTGGGAGAACTACTAAATGTGCAAGTGCTTCCTCTCCTTACGCTTCAAGTTAGTCTATGTTTATTTACTTTTTTCTTTTTAATGTTTAGCACCTCAATAAAATTATAGTTTTGTTCATCTAAAGGATTAAAAATTTGTACCGTTTAATAGAGAAAGGTATGCTAGATGGTGGTTCCAATGGGTCAAGTAAATCATTCACATTATCTAAAACTACAAACAGTCAATACTCATTTGGAAGTGAAACATCATTGCAAAAGTTGAAGTGCTTTAGTTTGAATGATCTGAAAGTAGCTACTAGAAACTTCCGACCAGACTCTTTTCTAGGAGAAGGAGGCTTTGGGTGTGTGTTTAAAGGGTGGATTGATGAGAAAACATTGGCTCCTGTCAAACCTGGAACTGGCATGGTGGTTGCTATCAAGAAACTAAAAAGAGAGAGCTTTCAAGGACATAAGGAATGGCTTGTATGTATACCCCTTTTCTTCCTTTTCCAGCATCCTTATAATTTCTCAATAAATTTTTGATCAACTTGTAATGAAAGTACTCATATTTCAAACTATTAATGAAATTTTATTGTCGGTGACTTGTTTCAATGTTTTGGGTAGATGAACCATCCTTTTGGAATTTCTCATATGATGAAATTTTCTGTACTACACAGAACAGAACTTCTTGAAATATTTGGCTTATTGGATGGGAATTTTTCTAAACCTAAATAACCTAAACATAACACTAATTGGATTGGAATTTCAAGCAAAATATGACTGCAATTCAAATTTGTTTCATGTTTTTTAATTTATTTAATAAATTATTAGTGCAGGCTAAATAGTAAAATAAATAGGATACTGAATTAGACATTGTTCATTTTTGTATGAATGCCATGTCATAAAATGGTACAATATGCCACAATGGAATGTATGAAACTTTTGGTTCGATAAACAAGATTTATATATATCATTGTATTTGTTAATCTGGTTACTGATATAAATATATTTGCAGGCAGAAGTAACGTTCCTAGGCCAGCTCCGGCATAATAATTTAGTGAAGCTAATTGGCTACTGCTGTGAACCTGAAAACAAACTTCTAGTTTATGAATTTGTACCGCGGGGGAGTTTAGAGAATCATTTATTTAAGAGTATGTTGCTCTCTTCCCTTATTTTTGCTCAAAGTTGCCTTTTTGTTCTGTCTAAATGAAACCCCAATACTATCATTGCCAAGGATATATTTTTTGCACCATGTTTATTCATTAAAAGATGGTATATGATGAATGTTAACAGAGCAAGGGTGGGAAGAAACTATCCATATGACACCACCAAGTTTTCATTTAACATATGCCATTTGTTATGTAATCTTACTCGATTACTCAACATACTCCCTCGGAACATTAGATTTCAAGTAAAGAATTAACCTTGTATTGCCTTTGTTATAGGAAAAGGTGAGCCCATTTCATGGACTATGCGCGTAAATATTGCCATTGATGTTGCAAAAGGGCTATCATTCCTTCACAGTCAACCAACTCCAGTAATATACCGGGATATGAAGGCATCAAATATACTTCTAGCCTCGGTACATACATCATTTTAATTGTGTTACTAAACATTAGTTTTTTGGTATATGGGATCCACATACATCCAAACATAATTAGTGTTAATTTTACTTTTCAAATACTAAAATATCGTTTGACATGCCATTTTTAAATGAATATGATTAAATTTTGTAATAGAATGAATAAGACGGGAAAAAAAGGAAGTTAAAATTGGATTTAAGCAAAAAAATTAGTAAGTATGGAAGTTATTTTTCAAAAATAAGCTGAGTTAAGATTAGCTGGAGTCATTTTAAAAAAGTTTCACCATTTTTAAGTATTTGTTTTATATAATAGATAGATGGATAAAATATTTGTTGGTAAATTTCAGGATTTCAAAGCAAAGCTTTCTGATTTTGGCTTGGCTAGAAATGGTCCAACTGGGGATAAAACTCATGTATCAACTAAGGTTGTCGGAACTCGTGGCTATGCCGCTCCTGAGTATATTGCCACAGGTTAGCATTTTCTCAAACCACGCATACAGATAAATATATAAAAGTAAAAAACAAATTCATTCACTGATTTGAATTTAAAAAAAAAAGAGCATTATGTAAATTAAATCTTTTTGTCCAGACTTATTATATTTTATATGATATGATGGCGCAAATCAGTGGATGAATCCCTTATTTCAGTTTTTATTATGGGATCAAGTTCATATCTATAATTTTGCCAATACCAGGTCACTTAAGCACATCGAGCGACGTATACAGCTTCGGAGTTGTATTATTAGAACTTTTATGTGGAAGGAGAGCATTAGATGAAAACAGACTTAGTGTAGAAGAAATATTAGTAGATTGGGCGATACCTTTCTTAACTAGTAGAAAGAAAATGCTGAGGATAGTGGATACAAGATTAGAAGGGCAATACTCAAAGAAAGAAGTTCAAGGAATTGCTGCCCTTGCCTTGCATTGCCTTGACATTGATCCCAAAAACCGACCAAATATGAATGAAGTTCTTTCCACACTGCAACAACTTCAGACATCAAGCAATGCCATTATTTCAACAAAAATAGATCAAAATGTCTCCTAATATATGGCATCATTTATTGTTCTTTTTGTTCGTTATGTTTGTTGACTTGTGGCTCTGAGAATGCTAGTTTTGTTACTTTTGTTTATACACCATTTACATCAATTTTTCCTGATATATGTCATTGATTGAATAAACAATTCTTTTAATTTTTTTATTTTTTTCCGCCCAGTCAACTCTTTTCCTTTGATATCCAAGAGGGACACATTTGATGGTACACATAAACAATATCTTGTATTGCAAGTTGTTGGTGGTGAAATGCGAGAACAGGATAGGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020249700.1	6.3e-143	probable serine/threonine-protein kinase PBL2
Swissprot	Q65XV8.1	6.1e-119	Receptor-like cytoplasmic kinase 176
trEMBL	A0A8T3APB2	1.2e-140	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G69790.1	62.80	4e-123	438		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G02635	AT5G02290.2	364	140	3	18	378	1	359	59.34	3e-123	438
AfisC5G02635	AT5G02290.1	364	140	3	18	378	1	359	59.34	3e-123	438
AfisC5G02635	AT1G69790.1	336	122	2	49	383	43	376	62.80	4e-123	438

Ortholog group

Species	Genes
Allium cepa	g97235.t1
Allium fistulosum	AfisC5G02635
Allium sativum	Asa4G04521.1
Arabidopsis thaliana
Oryza sativa	LOC_Os07g48730.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	94	369	167.1	4.1e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network