result

Gene information

Detail information of AfisC5G02669

Location

Gene	Chr	Start	End	Strand
AfisC5G02669	chr5	502380495	502383195	-

Sequences

CDS

>AfisC5G02669
ATGGAAGAACTACAAAAGGAATTACTGGAGGAGAAGATCAGAGGGGAAATTATTGCTCAAAGGATAATGCAAAAAAGGATGCTAGAAGAAGAAGCACGACGAAACTTCGAGTCAAATCATAAAATGTCTGAAAACACAACTGATGATCATCAATCAAGTCTGCTTGTAAACAACAGGGGTGCGGATGTTGCCCAAAGGCTGTCTTGTTCTCCCGTCATAGAGGAGACTAAAGAAATGCCTATGAAGATAGAGACACCGATCAAGAATGACTTTGTTTGCCAGAAGCGAAAATTTAGCACAACATCAGAAGAAACTATTGAAGTCAAACAGCAAAAGATAGTGACTGAGTGGGGATGTGCCCTTTGCCATTTTAGTGCTGCTAGTGAAGATGCATTCAAAGAACATTTAAAAGATCAGAATCACATAACTAATCTTTCAAAACTCAGTAATGGTAGCAGAAAAGCAACTGAGCATAACAACAACGAGAAGACTTTGACTGAAAAGGCAGGTAAAGTCCAGGAAACTAAGGAAATCAAAGCAGCTAATAAAACTCAAGAGGCAAAGGAGAAAGGTCTAGATGGGGGAGAACAGAACTGCAACATTTGTGGTGTCAGCGTAACTAGCAAATCTGCGCTCATCGAGCATGAAAAGGGGAAGAAACACTTGGCTAAGGTGGCAAAGTTCAATCCCAGTAATAATGGCAATGACACTTCCTTGAATGGCGAGGCCATTGTTAATACTCCAGAAAGCCAAGTAGCTCCGAAAAAATTGAAGAATGGGGAGGTTAAGGAGGCTGCAAGGACAAAGGATTTCTACTGCGCACTTTGCAACATCAACTGTTTCAGTGAAGGAGTACTGGATTCTCATTTGAAGGGAAAAAAACATTTGGCCATGGCTCAGAAAATGTCACTTGCTCCTGCCATCATCGTGACAGAGAAATCGTCTAATGAGCCAGAAAAAAATGTGGCTTCTGATAAGGCAAATACTAGCCATCCATCTGCACAAGCTCATGGAGTTGATCTACCAAAAGTAGAAAATACTGATTTGGGTTGCATTCTTTGCGATATTAGAGTGACTTGCAAACTTGCACTTGAAGAGCATCAGAGAGGGAAAAAGCACTTGGCTAATGTCATGAAAAAAAGCACCACTAATCAAAAGGGAAATGGGTGCAACAATTATTCTTCCTTGAAAGACAAAGCCATTAATACTCCAGTGATCAAAGAAGACATGAAAAGCCGAGAAATTCACGATGTTGCACATCAGAAATTTCTTGCTGCAGAGTATGTGCCTATGTGGTATCAAATGTTTAGAAAAAGAAGTGATGGCTTCTCATATGAAGTTTCAATTTTGTTAACACAATATTTGAGGGTGCTGAAATAA

Protein

Gene

>AfisC5G02669
AGAAATGTAAGATACTTCTTATTTTGATCTATTTTTTTCTTATCTCAACCGGTTCAGTTAGTTACACTGGTTTCAAAAACTTGTTACCCGGAGGTCAATCGATGGAAGAACTACAAAAGGAATTACTGGAGGAGAAGATCAGAGGGGAAATTATTGCTCAAAGGATAATGCAAAAAAGGATGCTAGAAGAAGAAGCACGACGAAACTTCGAGTCAAATCATAAAATGTCTGAAAACACAACTGATGATCATCAATCAAGTCTGCTTGTAAACAACAGGGGTGCGGATGTTGCCCAAAGGCTGTCTTGTTCTCCCGTCATAGAGGAGACTAAAGAAATGCCTATGAAGGTTTTCTTTTTATACCTTTAATGATTTCACTTAAAGCTTTTTATATCTGTTTTTTTGATATATATATGTATGTATGTATGTATGTATGTATGTATCATAACACCCCTTATATATAACATAACACCCCCATAACATCATATTTTATTAGTTAAGAGCATGCAAATCTTTTCGAGTGGGAAAACTAATTTTTAAGTTATAGTAAGGTGAATTGTAAGGATACTCTTGTCATGGATTTCTTCTTTTTAACTTGAATGTATCATTTGTGTTATGATTTGAGCAACAAATAGCAATGTGGGGGGTCAACTAGTCACATTTACAATGTCGTTTGAATTTGCAATTTTGTTAAAACAAAGTAGATTGCGTACTTTTTCTCATTAAAACAGCTTTTCTTTATTAGATGGAATACACCTGTAACCGCATCATAATGAATTAGCTAAGCTCTCTTTAAGTGGGAAAACATATTTTATTTTAAGCTATTTAAATTGTAAGAAAGCCCTTATTATGGATTTCTTCTTTTTGTAATTGGTATGTATAATTTGTGCCATGATTTGAGCACCAAATGGCAATGTGGAGAATGAACTTCTCACATTTACAACGTTATTCAAACTGAGATTTGTGTAGTAAAAACAAAGGATAATAGAAAGTAGATTTTGGACAGTTTTGTCATTAAAGCAAATGCTTTTTAATTGGATCAAATGTTTTTTTCCTCTATAAAGTACCTTCCTTAAACAGTATTGTTTCTCTATTCAGATAGAGACACCGATCAAGAATGACTTTGTTTGCCAGAAGCGAAAATTTAGCACAACATCAGAAGAAACTATTGAAGTCAAACAGCAAAAGATAGTGACTGAGTGGGGATGTGCCCTTTGCCATTTTAGTGCTGCTAGTGAAGATGCATTCAAAGAACATTTAAAAGATCAGAATCACATAACTAATCTTTCAAAACTCAGTAATGGTAGCAGAAAAGCAACTGAGCATAACAACAACGAGAAGACTTTGACTGAAAAGGCAGGTAAAGTCCAGGAAACTAAGGAAATCAAAGCAGCTAATAAAACTCAAGAGGCAAAGGAGAAAGGTCTAGATGGGGGAGAACAGAACTGCAACATTTGTGGTGTCAGCGTAACTAGCAAATCTGCGCTCATCGAGCATGAAAAGGGGAAGAAACACTTGGCTAAGGTGGCAAAGTTCAATCCCAGTAATAATGGCAATGACACTTCCTTGAATGGCGAGGCCATTGTTAATACTCCAGAAAGCCAAGTAGCTCCGAAAAAATTGAAGAATGGGGAGGTTAAGGAGGCTGCAAGGACAAAGGATTTCTACTGCGCACTTTGCAACATCAACTGTTTCAGTGAAGGAGTACTGGATTCTCATTTGAAGGGAAAAAAACATTTGGCCATGGCTCAGAAAATGTCACTTGCTCCTGCCATCATCGTGACAGAGAAATCGTCTAATGAGGTTCTTTCTCGATCTTTTCTGTTTTCTAATTTATCAAACACAAATTTCCCCAAAACTCAAGAAATTTGCAATATTAGAGTGACCGCATATAAGGCTTTCTAGTTCATTTTTGAATGTGCACCAATTAAAATGACCCTTATTTCCTTTTAAGAAAAAAGGAAAAAAGAGTGAACTATTTTTTAGCTTCTCATTGTCCATTATTGTTTTCAGAGGCTATGCAGTAAATCCTACCAATTCATGCTTTTTCATACATAACCCTCCTTGGTTTCTTCATTGTTATCCAATCTATTTCACCGATTTGTATGATGATATTAAAGCTAATTAAGATATGTTTCTGAATAATATTTCACTCTTGCTTTGGATAAAACAGCCAGAAAAAAATGTGGCTTCTGATAAGGCAAATACTAGCCATCCATCTGCACAAGCTCATGGAGTTGATCTACCAAAAGTAGAAAATACTGATTTGGGTTGCATTCTTTGCGATATTAGAGTGACTTGCAAACTTGCACTTGAAGAGCATCAGAGAGGGAAAAAGCACTTGGCTAATGTCATGAAAAAAAGCACCACTAATCAAAAGGGAAATGGGTGCAACAATTATTCTTCCTTGAAAGACAAAGCCATTAATACTCCAGTGATCAAAGAAGACATGAAAAGCCGAGAAATTCACGATGTTGCACATCAGAAATTTCTTGCTGCAGAGTATGTGCCTATGTGGTATCAAATGTTTAGAAAAAGAAGTGATGGCTTCTCATATGAAGTTTCAATTTTGTTAACACAATATTTGAGGGTGCTGAAATAACTATAAAAGGTGATTAGCGAATTTTAATGGGTCCTTGAGATCCGTTTTGCAAATACACTAGCCAACTTCAATGTTGTGTTAACAGAATTGTACTTTGTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010047067.1	1.8e-08	PREDICTED: uncharacterized protein LOC104436029
trEMBL	A0A059CKW4	1.3e-08	U1-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G61190.1	26.92	2e-08	57.8		putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G02669	AT5G61190.1	208	114	7	199	377	299	497	26.92	2e-08	57.8
AfisC5G02669	AT2G19380.1	194	124	6	199	386	87	261	23.20	6e-07	52.4

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12756.4	zf-C2H2_2	Family	90	144	23.9	3.5e-05
PF12874.4	zf-met	Domain	199	221	25.9	8.5e-06
PF12874.4	zf-met	Domain	271	295	37.0	2.7e-09
PF12874.4	zf-met	Domain	351	373	20.5	0.00042

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network