result

Gene information

Detail information of AfisC5G02732

Location

Gene	Chr	Start	End	Strand
AfisC5G02732	chr5	515024546	515026327	-

Sequences

CDS

Protein

Gene

>AfisC5G02732
GTTCAATACATAAATATCTCTCCTTCATAGTTTAATAACCAGTTTACAATTAACAAAGAAAATGGAACTAAAGCCAGGGATGTCAGCTTTAGTCACCGGAGGTGCAAATGGAATCGGCAGAGCTATTTCCTTGGCACTCGCCAAGAAAGGACTCTTTGTAACAATTCTTGATTTCTCCGAGCAGAAGGGAAATGAAACCGCTCCATTGATTGAAGGCTGAGAACAGAAAATTCCATCCAGACATCACTTTTCCATCTGTAACATTCATTAAGTGTGATGTTACCAACCCTGGTACGCAACTAACGTTTCTTTGTCATTGACCTTAATACTTCAATTAATATATATAGTAACATTCAAGCAAACTGATGTATTTTACGTGTAGTGGAACTATCCGCTGCATTTGAAAAGCATGTAGAAACGTATGGAGGTTTGGATGTAAGTGTACACAGCGCAGGAGTTGGAGTTACAGACACAAGTTTTGATGAGGATGAAACAGATGGCATTAATTCGTGGAGGCGCATCATCAATATCAACCTCACTGCTCTTGTTGACTGCACTCGCATTGCGGTACCATATCATGCACGCCCCTCTTCATGCATTGTATATAATATAAACTTATTACTAATTAAATATAACTGCAGATTCAAACAATGAGAAAATTGAAGAAGCCTGGGGCTGTGATGAATATGGGTTCAGCAGCGGGCCTTTACCCAGTGCCTGCTGATCCCATTTACTCAGCAAGTAAGGGTGGTGTTGTCTTGTTCACTAGATCATGTGCTTTATTAGGCCGTGAAGGCATCCGAGTCAACGCTCTTTGCCCCGAGGTACATATGTATTTCCAGTTATCCCTTCTTTAATTTATGAAAATCAATGACTTACCAAATATATGATGATCATGTATGTACAGTTTGTGAATACCGATGCCATATACGAGAAAAACCTACCTGATGTGAAAATGGTTGGAGGCTTTTTGCCTATGGAGACTATTGTACATGGTAAGCTTCATACCGATAATATCCAATTATAAGGGTATTCTTTTTATGCCCACGACTTCCTCTTAACGTTCATGTATATGTACATATATATTGCAGGAGCATTGGAGCTTATAACAAATGAAACTAAGGCAGGTGCATGTCTATGGATCACTAACCGTAGAGGCATGGAATACTGGCCATCTCCAGAAGAGGAGAAGAAAATATTTGGAGATTTACAACCCGAAAAATGGAGATGCAAAGCACATGCAGAGCTTCCAAAAACAAAAGCAGAGGAAGCATGGGCACTTGTAAAAGATTACTGCAACATCCACAAAATCATGCCTGCACTTTCTACCTGTGAAAAAGTAGAAGGCACAAACGAAGAACTTGGCTGTGTTCGCTATTGTGCAGGTGTAATGCATCCTTCAGAATTGCACTTTTGGGCGAGGGAGAGGTTGGTGGCACTGGATGATGCAGAGATGAGCTACAGTTATGATATTTTTGAGTGTAGTACTGGAGTTGAGGATTATACTGGTACAATGAAAGTAGTGAAGGGAGGAGAAGGCAATGGTGATGGATGTAGATTTGAATGGTCTATGGTGTGCAAACCTCTCGATGGTTTTACAGAGTCTGGATATGCTGGCATTCTGCAGAACTGGACTACCGATATTGCTCGGAGAATTGAAGAGATTTGTAATGCTTGATCATGTGTTTCTTTTCCAACAAGATGGTGTTAATTTGGTCTGTTGTTTACAACTTTATAAGTAACGTTTCTTTCTTGTAATAAACTGAGAATTGTACCGTTTGT

Functional annotation

Database	accession number	e-value	annotation
nr	BAC22639.1	4.2e-48	lachrymatory factor synthase
Swissprot	P59082.1	8.3e-49	Lachrymatory-factor synthase
trEMBL	Q8H940	3.1e-48	Lachrymatory factor synthase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G49670.1	52.05	8e-42	167	NQR	ARP protein (REF)

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G02732	AT1G49670.2	146	67	1	1	143	141	286	52.05	7e-42	167
AfisC5G02732	AT1G49670.1	146	67	1	1	143	141	286	52.05	8e-42	167
AfisC5G02732	AT2G25770.2	162	86	3	128	277	6	164	37.65	7e-25	111

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00106.22	adh_short	Domain	5	65	48.0	9.2e-13
PF10604.6	Polyketide_cyc2	Family	143	275	74.1	1.2e-20

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003955	F	NAD(P)H dehydrogenase (quinone) activity
GO:0005759	C	mitochondrial matrix
GO:0006690	P	icosanoid metabolic process
GO:0007186	P	G-protein coupled receptor signaling pathway
GO:0008753	F	NADPH dehydrogenase (quinone) activity
GO:0016616	F	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0033559	P	unsaturated fatty acid metabolic process
GO:0044597	P	daunorubicin metabolic process
GO:0044598	P	doxorubicin metabolic process
GO:0044703	P	multi-organism reproductive process
GO:0044706	P	multi-multicellular organism process
GO:0048038	F	quinone binding
GO:0051287	F	NAD binding
GO:0051289	P	protein homotetramerization
GO:0070402	F	NADPH binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network