result

Gene information

Detail information of AfisC5G02733

Location

Gene	Chr	Start	End	Strand
AfisC5G02733	chr5	515237570	515239350	-

Sequences

CDS

>AfisC5G02733
ATGGAACTAAAGCCAGGGATGTCAGCTTTAGTCACCGGAGGTGCAAATGGAATCGGCAGAGCTATTTCCTTGGCACTCGCCAAGAAAGGACTCTTTGTAACAATTCTTGATTTCTCCGAGCAGAAGGGAAATGAAACCGCTCCATTGATTGAAGCTGAGAACAGAATATTCCATCCAGACATCACTTTTCCATCTGTAACATTCATTAAGTGTGATGTTACCAATCCTGTGGAACTATCCGCTGCATTTGAAAAGCATGTAGAAACGTATGGAGGTTTGGATGTAAGTGTACACAGCGCAGGAGTTGGAGTTACAGACACAAGTTTTGATGAGGATGAAACAGATGGCATTAATTCGTGGAGGCGCATCATCAATATCAACCTCACTGCTCTTGTTGACTGCACTCGCATTGCGATTCAAACAATGAGAAAATTGAAGAAGCCTGGGGCTGTGATGAATATGGGTTCAGCAGCAGGCCTTTACCCAGTGCCTGCTGATCCAATTTACTCAGCAAGTAAGGGTGGTGTTGTCTTGTTCACTAGATCATGTGCTTTATTAGGCCGTGAAGGCATCCGAGTCAACGCTCTTTGCCCCGAGTTTGTGAATACAGACGCCATATACGAGAAAAATCTACCGGATGTGAAAATGGTTGGAGGCTTTTTGCCTATGGAGACTATTGTACATGGAGCATTGGAGCTTATAACAAATGAAACTAAGGCAGGTGCATGTCTATGGATCACTAACCGTAGAGGTATGGAATACTGGCCATCTCCAGAAGAGGAGAAGAAAATATTTGGAGATTTACAACCCCAAAAATGGAGATGCAAAGCACATGCAGAGCTTCCAAAAACAAAAGCAGAGGAAGCATGGGCACTTGTAAAAGATTACTGCAACATCCACAAAATCATGCCTGCACTATCTACCTGTGAAAAAGTAGAAGGCACAAACGAAGAACTTGGCTGTGTTCGCTATTGTGCAGGTGTAATGCATCCTTCAGAATTGCACTTTTGGGCGAGGGAGAGGTTGGTGGCACTGGATGATGCAGAGATGAGCTACAGTTATGATATTTTTGAGTGTAGTACTGGAGTTGAGGATTATACTGGTACAATGAAAGTAGTGAAGGGAGGAGAAGGCAATGGTGATGGATGTAGATTTGAATGGTCTATGGTGTGCAAACCTCTCGATGGTTTTACAGAGTCTGGATATGCTGGCATTCTGCAGAACTGGACTACCGATATTGCTCGGAGAATTGAAGAGATTTGTAATGCTTGA

Protein

Gene

>AfisC5G02733
GTTCAATACATAAATATCTCTCCTTCATAGTTTAATAACCAGTTTACAATTAACAAAGAAAATGGAACTAAAGCCAGGGATGTCAGCTTTAGTCACCGGAGGTGCAAATGGAATCGGCAGAGCTATTTCCTTGGCACTCGCCAAGAAAGGACTCTTTGTAACAATTCTTGATTTCTCCGAGCAGAAGGGAAATGAAACCGCTCCATTGATTGAAGCTGAGAACAGAATATTCCATCCAGACATCACTTTTCCATCTGTAACATTCATTAAGTGTGATGTTACCAATCCTGGTACGCAACTAACGTTTCTTAATTTGTCATTGACCTTAATACTTCAATATATATAGTAACATTTAAGCAAACTGATGTATTTTACGTGTAGTGGAACTATCCGCTGCATTTGAAAAGCATGTAGAAACGTATGGAGGTTTGGATGTAAGTGTACACAGCGCAGGAGTTGGAGTTACAGACACAAGTTTTGATGAGGATGAAACAGATGGCATTAATTCGTGGAGGCGCATCATCAATATCAACCTCACTGCTCTTGTTGACTGCACTCGCATTGCGGTACTATATCATGCACGCCCCTCTTCATGCATTATATATAATATAAACTTATTACTAATTAAATATAACTGCAGATTCAAACAATGAGAAAATTGAAGAAGCCTGGGGCTGTGATGAATATGGGTTCAGCAGCAGGCCTTTACCCAGTGCCTGCTGATCCAATTTACTCAGCAAGTAAGGGTGGTGTTGTCTTGTTCACTAGATCATGTGCTTTATTAGGCCGTGAAGGCATCCGAGTCAACGCTCTTTGCCCCGAGGTACATATGTATTTCCAGTTATCCCTTCTTTAATTCATGAAAATCAATGACTTACCAATATATGATGATCATGTATGTACAGTTTGTGAATACAGACGCCATATACGAGAAAAATCTACCGGATGTGAAAATGGTTGGAGGCTTTTTGCCTATGGAGACTATTGTACATGGTAAGCTTCATCCCGATAATATCCAATTATAAGGGTATTCTTTTTATGCCCACGGCTTCCTCTTAACGTTCATGTATATGTACAATATATTGCAGGAGCATTGGAGCTTATAACAAATGAAACTAAGGCAGGTGCATGTCTATGGATCACTAACCGTAGAGGTATGGAATACTGGCCATCTCCAGAAGAGGAGAAGAAAATATTTGGAGATTTACAACCCCAAAAATGGAGATGCAAAGCACATGCAGAGCTTCCAAAAACAAAAGCAGAGGAAGCATGGGCACTTGTAAAAGATTACTGCAACATCCACAAAATCATGCCTGCACTATCTACCTGTGAAAAAGTAGAAGGCACAAACGAAGAACTTGGCTGTGTTCGCTATTGTGCAGGTGTAATGCATCCTTCAGAATTGCACTTTTGGGCGAGGGAGAGGTTGGTGGCACTGGATGATGCAGAGATGAGCTACAGTTATGATATTTTTGAGTGTAGTACTGGAGTTGAGGATTATACTGGTACAATGAAAGTAGTGAAGGGAGGAGAAGGCAATGGTGATGGATGTAGATTTGAATGGTCTATGGTGTGCAAACCTCTCGATGGTTTTACAGAGTCTGGATATGCTGGCATTCTGCAGAACTGGACTACCGATATTGCTCGGAGAATTGAAGAGATTTGTAATGCTTGATCATGTGTTTCTTTTCCAACAAGATGGTGTTAATTTGGTCTGTTGTTTACAACTTTATAAGTAACGTTTCTTTCTTGTAATAAACTGAGAATTGTACCGTTGTTCT

Functional annotation

Database	accession number	e-value	annotation
nr	ONK67273.1	1.5e-97	uncharacterized protein A4U43_C06F18430
Swissprot	P59082.1	9.5e-49	Lachrymatory-factor synthase
trEMBL	A0A5P1ENN6	1.1e-97	Enoyl reductase (ER) domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G49670.1	53.66	4e-91	332	NQR	ARP protein (REF)

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G02733	AT1G49670.2	287	129	2	1	284	1	286	53.66	3e-91	332
AfisC5G02733	AT1G49670.1	287	129	2	1	284	1	286	53.66	4e-91	332
AfisC5G02733	AT2G25770.2	162	87	3	269	418	6	164	37.04	2e-24	110

Ortholog group

Species	Genes
Allium cepa	g233463.t1
Allium fistulosum	AfisC5G02733
Allium sativum	Asa4G04412.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00106.22	adh_short	Domain	9	206	136.2	8e-40
PF10604.6	Polyketide_cyc2	Family	284	416	72.8	3.1e-20

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0006690	P	icosanoid metabolic process
GO:0006725	P	cellular aromatic compound metabolic process
GO:0007186	P	G-protein coupled receptor signaling pathway
GO:0016137	P	glycoside metabolic process
GO:0016616	F	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016655	F	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0030638	P	polyketide metabolic process
GO:0033559	P	unsaturated fatty acid metabolic process
GO:0043168	F	anion binding
GO:0044446	C	intracellular organelle part
GO:0044703	P	multi-organism reproductive process
GO:0044706	P	multi-multicellular organism process
GO:0051262	P	protein tetramerization
GO:0051287	F	NAD binding
GO:0070013	C	intracellular organelle lumen
GO:0097164	P	ammonium ion metabolic process
GO:1901360	P	organic cyclic compound metabolic process
GO:1901661	P	quinone metabolic process
GO:1902652	P	secondary alcohol metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network