Detail information of AfisC5G02803


Location
GeneChrStartEndStrand
AfisC5G02803chr5528954437528958996+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrMBA0757761.11.5e-34hypothetical protein
SwissprotQ94CK9.18.0e-20Protein LATERAL ROOT PRIMORDIUM 1
trEMBLA0A7J9DAS31.1e-34Protein LATERAL ROOT PRIMORDIUM 1 (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G12330.450.002e-27 118LRP1Lateral root primordium (LRP) protein-related

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05142.9DUF702Family811187.88.6e-25

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0009299PmRNA transcription
GO:0009734Pauxin-activated signaling pathway
GO:0009851Pauxin biosynthetic process
GO:0009938Pnegative regulation of gibberellic acid mediated signaling pathway
GO:0010051Pxylem and phloem pattern formation
GO:0010252Pauxin homeostasis
GO:0042803Fprotein homodimerization activity
GO:0046982Fprotein heterodimerization activity
GO:0048364Proot development
GO:0048479Pstyle development
GO:0048480Pstigma development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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