Detail information of AfisC5G02901


Location
GeneChrStartEndStrand
AfisC5G02901chr5544532054544550019+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276345.10.0e+00serine/threonine-protein kinase TIO
SwissprotQ2QAV0.10.0e+00Protein TWO-IN-ONE
trEMBLA0A5P1EDG60.0e+00non-specific serine/threonine protein kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G50240.253.070.01306FUProtein kinase family protein with ARM repeat domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag80403.t1
Allium fistulosumAfisC5G02901
Allium sativumAsa4G04175.1; Asa4G04176.1
Arabidopsis thalianaAT1G50240.2
Oryza sativaLOC_Os12g24550.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain6256257.41.2e-76
PF13646.3HEAT_2Family1105121030.43.4e-07

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0000793Ccondensed chromosome
GO:0000287Fmagnesium ion binding
GO:0000775Cchromosome, centromeric region
GO:0000785Cchromatin
GO:0000911Pcytokinesis by cell plate formation
GO:0003351Pepithelial cilium movement
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0005815Cmicrotubule organizing center
GO:0007228Ppositive regulation of hh target transcription factor activity
GO:0007420Pbrain development
GO:0007568Paging
GO:0008134Ftranscription factor binding
GO:0008285Pnegative regulation of cell proliferation
GO:0009409Presponse to cold
GO:0009524Cphragmoplast
GO:0009558Pembryo sac cellularization
GO:0009651Presponse to salt stress
GO:0009791Ppost-embryonic development
GO:0010506Pregulation of autophagy
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0030496Cmidbody
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032133Cchromosome passenger complex
GO:0032465Pregulation of cytokinesis
GO:0034045Cpre-autophagosomal structure membrane
GO:0035175Fhistone kinase activity (H3-S10 specific)
GO:0036089Pcleavage furrow formation
GO:0042594Presponse to starvation
GO:0043987Phistone H3-S10 phosphorylation
GO:0044702Psingle organism reproductive process
GO:0045880Ppositive regulation of smoothened signaling pathway
GO:0046777Pprotein autophosphorylation
GO:0048671Pnegative regulation of collateral sprouting
GO:0048675Paxon extension
GO:0051054Ppositive regulation of DNA metabolic process
GO:0051179Plocalization
GO:0051233Cspindle midzone
GO:0051255Pspindle midzone assembly
GO:0090307Pmitotic spindle assembly
GO:0098813Pnuclear chromosome segregation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06228FU; fusedEC:2.7.11.1 Hedgehog signaling pathway - flyko04341
K11912ppkA; serine/threonine-protein kinase PpkAEC:2.7.11.1 Bacterial secretion systemko03070
Biofilm formation - Pseudomonas aeruginosako02025

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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