Detail information of AfisC5G03056


Location
GeneChrStartEndStrand
AfisC5G03056chr5566612323566633285+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252523.10.0e+00histone acetyltransferase HAC1-like isoform X1
SwissprotQ9C5X9.20.0e+00Histone acetyltransferase HAC1
trEMBLA0A5P1FJT50.0e+00histone acetyltransferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G16710.151.220.01594HAC12histone acetyltransferase of the CBP family 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag178058.t1
Allium fistulosumAfisC5G03056
Allium sativum
Arabidopsis thalianaAT1G16710.1; AT1G16710.2; AT1G55970.1; AT1G79000.1; AT1G79000.2; AT3G12980.1
Oryza sativaLOC_Os01g14370.1; LOC_Os01g14370.2; LOC_Os02g04490.1; LOC_Os06g49130.1; LOC_Os06g49130.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02135.13zf-TAZFamily66172742.85.1e-11
PF00628.26PHDDomain1047108930.22.8e-07
PF08214.8HAT_KAT11Domain11501362105.04.4e-30
PF00569.14ZZDomain1546157923.53.2e-05
PF02135.13zf-TAZFamily1614168450.32.4e-13

Gene Ontology
AccessionOntologyName
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0001085FRNA polymerase II transcription factor binding
GO:0001159Fcore promoter proximal region DNA binding
GO:0002376Pimmune system process
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003712Ftranscription cofactor activity
GO:0051726Pregulation of cell cycle
GO:0006915Papoptotic process
GO:0005739Cmitochondrion
GO:0004402Fhistone acetyltransferase activity
GO:0005654Cnucleoplasm
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0006974Pcellular response to DNA damage stimulus
GO:0009653Panatomical structure morphogenesis
GO:0009628Presponse to abiotic stimulus
GO:0009908Pflower development
GO:0009966Pregulation of signal transduction
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0022607Pcellular component assembly
GO:0010941Pregulation of cell death
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0016573Phistone acetylation
GO:0030154Pcell differentiation
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031399Pregulation of protein modification process
GO:0035257Fnuclear hormone receptor binding
GO:0043234Cprotein complex
GO:0044093Ppositive regulation of molecular function
GO:0044427Cchromosomal part
GO:0044877Fmacromolecular complex binding
GO:0048513Panimal organ development
GO:0048584Ppositive regulation of response to stimulus
GO:0051240Ppositive regulation of multicellular organismal process
GO:0065008Pregulation of biological quality
GO:0071383Pcellular response to steroid hormone stimulus
GO:0072331Psignal transduction by p53 class mediator
GO:1901701Pcellular response to oxygen-containing compound

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04498EP300, CREBBP, KAT3; E1A/CREB-binding proteinEC:2.3.1.48 Wnt signaling pathwayko04310
Notch signaling pathwayko04330
TGF-beta signaling pathwayko04350
Jak-STAT signaling pathwayko04630
HIF-1 signaling pathwayko04066
FoxO signaling pathwayko04068
cAMP signaling pathwayko04024
Cell cycleko04110
Adherens junctionko04520
Glucagon signaling pathwayko04922
Growth hormone synthesis, secretion and actionko04935
Thyroid hormone signaling pathwayko04919
Melanogenesisko04916
Long-term potentiationko04720

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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