Detail information of AfisC5G03136


Location
GeneChrStartEndStrand
AfisC5G03136chr5579769516579769895-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA56290.13.5e-37BTB/POZ domain-containing protein POB1
SwissprotO82343.26.5e-36BTB/POZ domain-containing protein At2g46260
trEMBLA0A2I0AL732.6e-37BTB/POZ domain-containing protein POB1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G46260.174.512e-39 156LRB1BTB/POZ/Kelch-associated protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag294072.t1
Allium fistulosumAfisC5G03136
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00651.28BTBDomain24523.83.6e-05

Gene Ontology
AccessionOntologyName
GO:0004842Fubiquitin-protein transferase activity
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0010114Presponse to red light
GO:0031463CCul3-RING ubiquitin ligase complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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