Detail information of AfisC5G03198
| Gene | Chr | Start | End | Strand |
|---|
| AfisC5G03198 | chr5 | 588479297 | 588480153 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020256054.1 | 1.6e-47 | GATA transcription factor 5-like |
| Swissprot | O82632.1 | 7.8e-28 | GATA transcription factor 9 |
| trEMBL | A0A8T3BZZ9 | 8.9e-45 | GATA-type domain-containing protein |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G32890.1 | 43.56 | 2e-35 | 145 | GATA9 | GATA transcription factor 9 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC5G03198 | AT4G32890.1 | 202 | 90 | 6 | 6 | 199 | 76 | 261 | 43.56 | 2e-35 | 145 |
| AfisC5G03198 | AT2G45050.1 | 194 | 81 | 5 | 6 | 199 | 75 | 243 | 45.36 | 3e-34 | 141 |
| AfisC5G03198 | AT5G25830.1 | 212 | 95 | 7 | 10 | 199 | 82 | 283 | 40.09 | 2e-32 | 135 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00320.24 | GATA | Domain | 137 | 171 | 61.2 | 4.8e-17 |
| Accession | Ontology | Name |
|---|
| GO:0000977 | F | RNA polymerase II regulatory region sequence-specific DNA binding
|
| GO:0001085 | F | RNA polymerase II transcription factor binding
|
| GO:0001228 | F | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
|
| GO:0003682 | F | chromatin binding
|
| GO:0005634 | C | nucleus
|
| GO:0005667 | C | transcription factor complex
|
| GO:0007623 | P | circadian rhythm
|
| GO:0008270 | F | zinc ion binding
|
| GO:0009416 | P | response to light stimulus
|
| GO:0009845 | P | seed germination
|
| GO:0030154 | P | cell differentiation
|
| GO:0045944 | P | positive regulation of transcription from RNA polymerase II promoter
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| - | - | - | - | - |