result

Gene information

Detail information of AfisC5G03373

Location

Gene	Chr	Start	End	Strand
AfisC5G03373	chr5	615017164	615020333	+

Sequences

CDS

>AfisC5G03373
ATGGCATTATTTGGAGAAATTTTCAGTTTGATTTCCGGACTTATAGTCATTTGTTGTTGTTTACTGAAATACAATGAAATGAGATACAGAAAGAAAGGGTTGCCACCAGGGACTATGGGATGGCCATTATTTGGAGAGACTACTGAGTTTCTAAGGCAAGGTCCTGATTTCATGAAAAATCAAATGGCCAAGTATGGAACAATATTCAAGTCGCATATACTGGGATGTCCAACAGTAGTGTGCATGGATGCAGAGCTAAACAGATACATTCTATTGAATGAAGGAAAAGGTTTTTTACCTGGCTATCCACAATCTATGCTTGATATCTTAGGCAAGAATAACATTGCTGCAGTAAGTGGTTCGATTCACAAGACCATGCGAAGTTCGATGCTTAGTATTGTGAGTCCTTCTATGATCAGAGGCCAACTCCTACCAAAGATTGATCAATTTATGAGATCACATATTAGTACCTGGAACAATAAAATCATTGATATTCAGGAGAAAACTAAAGAGATGGCACTCTTTTCAAGCCTGAAGCAAATTGCTAGCATTGAAAATAATCCATTTGCTGAAGCATTAAAAATAGAAATATTTCAGCTGGTTCATGGAACTCTTTCATTGCCAATTAATCTGCCAGGCACTAATTATCATCGTGCTTTTGAGGCAAGGAAAAAAGTTATAAGCATGTTGGAAGAAATTATCAAGGACCGGAGGTCTTCTAAGAAATTGCACAATGACATGCTTGATTGTCTCTTATCCAAAGATAATGATTCAAAAGAAAAACTAAATGATGATCAGATTATTGATTTGATGATTTCTTTGATTTATTCTGGTTATGAAACTGTTTCAACTACTTCGATGATGGCTATCAAGTATCTCCATGACAATCCTAAAGCTCTTGAAGAGATAAGGAATGAACATTTAGAGATCAGAAAAGGAAAGTCATCCGAAGATGAACTTAACTGGAATGACTACAAGTCTATGAAATTTACTCGTGCGGTAATTTATGAAACGCTGAGAATGGCTACAGTCGTAAATGGAGTGCTCAGGAAAACAACCCAAGACATGGAATTGAGAGGATATGTAATTCCAAAGGGGTGGAGAATATATGTATACACAAGGGAGATCAACTACGACCCTTGTATATATCCCGAACCTTCAACCTTCAATCCATGGAGATGGATGGATAGTAACTTGGAGTCACATCAGCACTTAATGTTGTTTGGAGGTGGTGGCAGATTATGCCCCGGAAAAGATTTGGGAATGGCCGAGATTTCTACATTCCTTCATTACTTTATTACGAAATACAGGTATCAATGGAGTTTTTACTTTACACAGTTAATGATAATGATATCCTTAAGAAATAAAAAATTAATGCACATTTGTTCACTAATCATCTAG

Protein

Gene

>AfisC5G03373
CAACTCTTATTTATCCTAAGTAAGTGTTTAAAAGCTCAATTGTAAGAGTATTTATCCTAATAAAAATAAAATGGCATTATTTGGAGAAATTTTCAGTTTGATTTCCGGACTTATAGTCATTTGTTGTTGTTTACTGAAATACAATGAAATGAGATACAGAAAGAAAGGGTTGCCACCAGGGACTATGGGATGGCCATTATTTGGAGAGACTACTGAGTTTCTAAGGCAAGGTCCTGATTTCATGAAAAATCAAATGGCCAAGTAAGATTTTATCTCATTTTTCAGCATTTTTTTTATGAATCTGAAATGCTGCTTTTATAGATTGCCTTATATAACATCATTCTCCCTTCAGATACTGTAGTTCTTTTCTTATTTTATATTTTATTTTATTTTAAACATACTGATTGTTTGAAAATAGTGGAAATGAAGCAAGTTATAAGTTTGAAAAGGGTTTAATTTAAAAAGGTGAAAAACAAATATGTATACTGATTCCTGATCACAGATGTAAATAAGTAAAGAACTAAAAAATCCTTAACTATCTTCGAATCCTTGGTAGGAAAGGTATCTGATGCTTTTACGTCACAACTTAGAATTCATATACCTATCTACCGAATATAATCCAGACAACTCCCTATACATATTCTTTTTAATTTGTGCTACCAAACTCTAACACAGGTGCTGCATGCACAGAAAGAACTATTTCATATTCATGAATATGAAGAAAACTAACGTTGTATACTGGATTTTTTTTGGTGATTTAAAGGTATGGAACAATATTCAAGTCGCATATACTGGGATGTCCAACAGTAGTGTGCATGGATGCAGAGCTAAACAGATACATTCTATTGAATGAAGGAAAAGGTTTTTTACCTGGCTATCCACAATCTATGCTTGATATCTTAGGCAAGAATAACATTGCTGCAGTAAGTGGTTCGATTCACAAGACCATGCGAAGTTCGATGCTTAGTATTGTGAGTCCTTCTATGATCAGAGGCCAACTCCTACCAAAGATTGATCAATTTATGAGATCACATATTAGTACCTGGAACAATAAAATCATTGATATTCAGGAGAAAACTAAAGAGGTTAGAAAATTTTCATTTGTAGAAATTATATGACATCCAGTTGTTTCAATCCCCAGTAGAGAGAGTGAATGAAGAGTGTGGTATCAAAGTTAAAATTGTTTTATTCTTTGGTGATCAGATGGCACTCTTTTCAAGCCTGAAGCAAATTGCTAGCATTGAAAATAATCCATTTGCTGAAGCATTAAAAATAGAAATATTTCAGCTGGTTCATGGAACTCTTTCATTGCCAATTAATCTGCCAGGCACTAATTATCATCGTGCTTTTGAGGTAACAAATGCTCTAAATCGTGATTAAAAAAATTCTGCAGTTAACTGATTTTGAAATTTTATGCTAACTCTAACTTTCTTTTTCCAGGCAAGGAAAAAAGTTATAAGCATGTTGGAAGAAATTATCAAGGACCGGAGGTCTTCTAAGAAATTGCACAATGACATGCTTGATTGTCTCTTATCCAAAGATAATGATTCAAAAGAAAAACTAAATGATGATCAGATTATTGATTTGATGATTTCTTTGATTTATTCTGGTTATGAAACTGTTTCAACTACTTCGATGATGGCTATCAAGTATCTCCATGACAATCCTAAAGCTCTTGAAGAGATAAGGGTAGGTATTCCTAGATAATCTTATTTCTTGTGAAGACAAGAATATTGCAACGACAAACGTGACAGAGTAACCAGTGAACTAAATCTGTGCACAATACCATATTAACTTGTAGAATTACTCCTACCTTTAACTTGAAATTAAGAGGGATAGATAAGGACAATGGTGTCAATTTCACTGGTAGTACATAACTTCTATGTTATATAATAGATAAAAATATTTTTTCTTTCATCGCACAATGCTGTCTTTTTCACATGACCAATACATTTGGCCCTTATTTCCTGTCTAACTGTCCTGTTGATTGTGATAAATTACTGAATGCAGAATGAACATTTAGAGATCAGAAAAGGAAAGTCATCCGAAGATGAACTTAACTGGAATGACTACAAGTCTATGAAATTTACTCGTGCGGTAAGAAGATCGAAATTGTTTAGATCATATTGATAGGATAACAGTTTTGATAGCAAAGAGCTTACCCATATCTTACTCCTTTTAGGTAATTTATGAAACGCTGAGAATGGCTACAGTCGTAAATGGAGTGCTCAGGAAAACAACCCAAGACATGGAATTGAGAGGTTGGTTTTTTTTTTAAAACCACATCTTCAAAGTATAATATTCTACTATGCATTTTAGTTTCGCTGACACAAGTAGTAAAAATAACTAACTATGTTTTACACAGGATATGTAATTCCAAAGGGGTGGAGAATATATGTATACACAAGGGAGATCAACTACGACCCTTGTATATATCCCGAACCTTCAACCTTCAATCCATGGAGATGGATGGTAAGTTTACAGAACTAACAAAGAAATATTGTGCTTTATTCTTGAGGATAAATGGTGAGCTAATACAGTTTCTGTGAATATTTAAATCTATTGCCAGGATAGTAACTTGGAGTCACATCAGCACTTAATGTTGTTTGGAGGTGGTGGCAGATTATGCCCCGGAAAAGATTTGGGAATGGCCGAGATTTCTACATTCCTTCATTACTTTATTACGAAATACAGGTATCAATGGAGTTTTTACTTTACACAGTTAATGATAATGATATCCTTAAGAAATAAAAAATTAATGCACATTTGTTCACTAATCATCTAGTCCGACTAGTGTAGCAAAACATTACCATCCCATATATGTTATAGTATTTTCTTCCTCATTATAAAGATAAATCATCGACACGCTATAAATTAAACCGCTATTGAATGTTTTGCAGATGGGAAGAAGTTGGAAGCGACACGATTCAAAAATTTCCCAGAGTGGAAGCACCAAAAGGGTTACACATTCGTGTTCAAAACTACTAAGATTTTTAGCGAAGTATCGATGTACATACGGAGGTTTACTGACAAAGCACTCGGCAGATCAGTTTTTGTATAATGACTCACATTGAGAGACTGAATAGATACATAGACATACAGACAATGGAATTACCAAATTATTATTCTCCTTCCATGAATTTTCATTTGTCACTAATACAAAATTTTCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269916.1	7.4e-207	cytochrome P450 85A1-like
Swissprot	Q8GSQ1.1	2.6e-180	OsDWARF
trEMBL	A0A8B7BV21	1.8e-199	cytochrome P450 85A1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G30180.1	60.45	5e-164	574	BR6OX2;CYP85A2	brassinosteroid-6-oxidase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G03373	AT3G30180.1	440	172	2	1	439	1	439	60.45	5e-164	574
AfisC5G03373	AT5G38970.1	427	169	2	14	439	14	439	59.95	3e-160	561
AfisC5G03373	AT5G38970.3	412	170	3	1	411	5	411	57.28	2e-142	503

Ortholog group

Species	Genes
Allium cepa	g119516.t1; g71298.t1
Allium fistulosum	AfisC5G03373
Allium sativum	Asa0G00680.1; Asa0G01647.1; Asa1G02679.1; Asa2G02090.1; Asa2G05096.1; Asa4G00173.1; Asa4G03950.1; Asa5G01387.1; Asa5G05498.1; Asa6G05435.1; Asa7G07484.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	35	439	209.4	7.9e-62

Gene Ontology

Accession	Ontology	Name
GO:0016021	C	integral component of membrane
GO:0001578	P	microtubule bundle formation
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0005506	F	iron ion binding
GO:0022900	P	electron transport chain
GO:0006950	P	response to stress
GO:0009647	P	skotomorphogenesis
GO:0009687	P	abscisic acid metabolic process
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010224	P	response to UV-B
GO:0010268	P	brassinosteroid homeostasis
GO:0010584	P	pollen exine formation
GO:0019825	F	oxygen binding
GO:0016125	P	sterol metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0020037	F	heme binding
GO:0048366	P	leaf development
GO:0048441	P	petal development
GO:0048657	P	anther wall tapetum cell differentiation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09590	CYP85A1, BR6OX1; brassinosteroid-6-oxidase 1	EC:1.14.-.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network