result

Gene information

Detail information of AfisC5G04310

Location

Gene	Chr	Start	End	Strand
AfisC5G04310	chr5	791830595	791832739	+

Sequences

CDS

>AfisC5G04310
ATGTCTAGAAAAACCACCTTCCTCTTTATTCTCTTTCCTATTTTTCTGACCTCCACTCTCTCTCAACAAGACTCATTCATCTACAATGGCTTCAATTCACCAGCAACAAATCTGAGCTTAAACGGCATAGCAGAAATTGAACCCTCAGGCATATTGAAGGTCACTAATGAAACAAGCAGACTTCTCGGCCATGCTTTCTATCCAAACCCCATCACATTCAAAACCTCCAACAGTTCTTCCTCGCTCTCCTTCTCAACTTCCTTCGTCTTTGCTGTAGTCCCTGAATACCCAAAACTCGGCGGCCATGGCTTCGCCTTCGTCATCTCTCCTACCAAAGAGTTGGCCGGAGCGCAACCCAGCCAGTACTTGGGTATTTTTAACGCGAGCGACGTCAGCAACGTCACAGATCACAAATTCGCCATCGAGTTTGACACAGTGCAAGATTTCGAATTCTTCGACAGAAACGACAATCACATCGGTGTCGACATCAACAATCTAATCTCCAACAAATCCGTCGCCGCCGCCTACTTCGACGACGACGGTCAGAAGCAAGATCTGAACCTCAAAAGCGGCGACAGAATCCAAGCATGGGTAGACTACGACGGCGTCAATAAAATCCTCAACGTCACGATTTCGCCTTTCTCGAAAAAACCCAACATTCCCATAATTTCGTATCAAGTAGATCTATCTCCAATTTTGCAAAACAAAATGTACGTTGGATTTTCCGCTTCAACCGGCTTGCTTGCGAGCTCTCACTACTTAATGGGCTGGAGCTTCGCGTTAAACAAACCCGCTATGGCTTTAGAAATGTCATCTTTGCCCTCCTTACCAAAACCTAAAAGAACGCACACCATCTTCACAATCATAATGTCATCCGCGGCTTTCTTCATATTCCTCCTAGCAATCGCAGCAGCAGGCTACATCTACTACAAAATAAAAAACGCAGACATAATCGAACCGTGGGAATTCGAGTACGGCCCTCACAGATTCTCGTACACGGAGCTCAAACGCGCTACGAAAAGCTTCCGGGACAAAGAATTGCTAGGAAGCGGCGGATTCGGTAAGGTATACAAAGGAGTTCTTCCGAACGCCAAAACCGAAGTCGCCGTCAAAAGAGTCGCGCACGGATCGAAACAGGGGTTACGGGAATTCGTAGCGGAAATCGCCAGCATCGGACGCTTGCGTCACAGAAATTTAGTCCGCCTCCAAGGCTGGTGCAGGCGTCGCTCCGACCTCCTACTCGTGTACGATTACATGGAAAACGGCAGCCTCGACAAATTCTTGTTTCAAGACGGGCCGAGTTCCAGCCCTACCCAAAGCCCAACCCCAAACCTAAAGCATCCCGTGTTTATTCTCTCGTGGGGCCAGAGGTTTAAAATAATAAAAGACGTGGCGTCCGCTTTGTTATACCTTCACGAGGAATGGGAGCACGTGGTGATTCACAGAGACGTGAAGGCCAGTAACGTGTTGCTCGATTCGGAATTCAAAGGCAGGCTGGGCGATTTCGGGCTGGCTAAACTGTACGAGCACGGGGCTAACCCGAGCACGACCCGGGTCGTGGGTACGTTGGGCTATTTGGCGCCCGAACTGACCCGGACCGGGAAGGCGACGACCAGCTCGGACGTGTTTGCGTTCGGGGCGTTGGTGTTGGAAATAGTGTGCGGGCGGAGGCCCATAGAGCCCAAGGCGGACCCCGATGAGCTAGTGCTGGTGGATTGGGTATGGGAGAAGTACAGTACTGGTAAGTGGGCAGAGGCGCTGGACCCGAAGATGGACGGGTGCGAGTTTGTGGAGGCGGAGGTGGCGATGCGGGTTGGGTTGATATGTTCGCACCCGTTGAGTGGGGTGAGGCCTAGCATGAGGGAGGTGGTGAGGTATTTGGACGGCGGGGATGTGCTGGAGGTGCCGGTGGTGAAAATGCCGCCGAGCGAGTATGAAGGGGTGGCTAAGAGCGGGCTCGGGTTTGAGGATTTTGTTCATTCGTACCCGTCGTCTTCGTTCGAGAAGTTGGAGGAGGAAGGAGAAGGTACGGGTGGGGACCGGAGTTTGATTGGGGGTATGTTTAAGTATTCTCCTATGTCTTTGTTGTCACGTAGCAATGTGTAA

Protein

Gene

>AfisC5G04310
CCAAAACCAAAAGAATACTCACCTCCAAGCTCAAAATCCATGTCTAGAAAAACCACCTTCCTCTTTATTCTCTTTCCTATTTTTCTGACCTCCACTCTCTCTCAACAAGACTCATTCATCTACAATGGCTTCAATTCACCAGCAACAAATCTGAGCTTAAACGGCATAGCAGAAATTGAACCCTCAGGCATATTGAAGGTCACTAATGAAACAAGCAGACTTCTCGGCCATGCTTTCTATCCAAACCCCATCACATTCAAAACCTCCAACAGTTCTTCCTCGCTCTCCTTCTCAACTTCCTTCGTCTTTGCTGTAGTCCCTGAATACCCAAAACTCGGCGGCCATGGCTTCGCCTTCGTCATCTCTCCTACCAAAGAGTTGGCCGGAGCGCAACCCAGCCAGTACTTGGGTATTTTTAACGCGAGCGACGTCAGCAACGTCACAGATCACAAATTCGCCATCGAGTTTGACACAGTGCAAGATTTCGAATTCTTCGACAGAAACGACAATCACATCGGTGTCGACATCAACAATCTAATCTCCAACAAATCCGTCGCCGCCGCCTACTTCGACGACGACGGTCAGAAGCAAGATCTGAACCTCAAAAGCGGCGACAGAATCCAAGCATGGGTAGACTACGACGGCGTCAATAAAATCCTCAACGTCACGATTTCGCCTTTCTCGAAAAAACCCAACATTCCCATAATTTCGTATCAAGTAGATCTATCTCCAATTTTGCAAAACAAAATGTACGTTGGATTTTCCGCTTCAACCGGCTTGCTTGCGAGCTCTCACTACTTAATGGGCTGGAGCTTCGCGTTAAACAAACCCGCTATGGCTTTAGAAATGTCATCTTTGCCCTCCTTACCAAAACCTAAAAGAACGCACACCATCTTCACAATCATAATGTCATCCGCGGCTTTCTTCATATTCCTCCTAGCAATCGCAGCAGCAGGCTACATCTACTACAAAATAAAAAACGCAGACATAATCGAACCGTGGGAATTCGAGTACGGCCCTCACAGATTCTCGTACACGGAGCTCAAACGCGCTACGAAAAGCTTCCGGGACAAAGAATTGCTAGGAAGCGGCGGATTCGGTAAGGTATACAAAGGAGTTCTTCCGAACGCCAAAACCGAAGTCGCCGTCAAAAGAGTCGCGCACGGATCGAAACAGGGGTTACGGGAATTCGTAGCGGAAATCGCCAGCATCGGACGCTTGCGTCACAGAAATTTAGTCCGCCTCCAAGGCTGGTGCAGGCGTCGCTCCGACCTCCTACTCGTGTACGATTACATGGAAAACGGCAGCCTCGACAAATTCTTGTTTCAAGACGGGCCGAGTTCCAGCCCTACCCAAAGCCCAACCCCAAACCTAAAGCATCCCGTGTTTATTCTCTCGTGGGGCCAGAGGTTTAAAATAATAAAAGACGTGGCGTCCGCTTTGTTATACCTTCACGAGGAATGGGAGCACGTGGTGATTCACAGAGACGTGAAGGCCAGTAACGTGTTGCTCGATTCGGAATTCAAAGGCAGGCTGGGCGATTTCGGGCTGGCTAAACTGTACGAGCACGGGGCTAACCCGAGCACGACCCGGGTCGTGGGTACGTTGGGCTATTTGGCGCCCGAACTGACCCGGACCGGGAAGGCGACGACCAGCTCGGACGTGTTTGCGTTCGGGGCGTTGGTGTTGGAAATAGTGTGCGGGCGGAGGCCCATAGAGCCCAAGGCGGACCCCGATGAGCTAGTGCTGGTGGATTGGGTATGGGAGAAGTACAGTACTGGTAAGTGGGCAGAGGCGCTGGACCCGAAGATGGACGGGTGCGAGTTTGTGGAGGCGGAGGTGGCGATGCGGGTTGGGTTGATATGTTCGCACCCGTTGAGTGGGGTGAGGCCTAGCATGAGGGAGGTGGTGAGGTATTTGGACGGCGGGGATGTGCTGGAGGTGCCGGTGGTGAAAATGCCGCCGAGCGAGTATGAAGGGGTGGCTAAGAGCGGGCTCGGGTTTGAGGATTTTGTTCATTCGTACCCGTCGTCTTCGTTCGAGAAGTTGGAGGAGGAAGGAGAAGGTACGGGTGGGGACCGGAGTTTGATTGGGGGTATGTTTAAGTATTCTCCTATGTCTTTGTTGTCACGTAGCAATGTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009416157.2	4.9e-263	PREDICTED: L-type lectin-domain containing receptor kinase S.4-like
Swissprot	Q9M2S4.1	1.7e-199	L-type lectin-domain containing receptor kinase S.4
trEMBL	A0A804KFH2	3.5e-263	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G55550.1	55.90	0.0	704	LecRK-S.4	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04310	AT3G55550.1	619	247	6	17	628	19	618	55.90	0.0	704
AfisC5G04310	AT3G53810.1	616	265	6	21	629	22	621	53.25	0.0	641
AfisC5G04310	AT2G37710.1	679	301	11	21	686	22	674	49.93	4e-179	625

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	24	274	260.5	1.4e-77
PF00069.22	Pkinase	Domain	343	562	151.7	2.1e-44

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0002229	P	defense response to oomycetes
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress
GO:0090333	P	regulation of stomatal closure
GO:1900425	P	negative regulation of defense response to bacterium

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network