Detail information of AfisC5G04399


Location
GeneChrStartEndStrand
AfisC5G04399chr5809183361809183858+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010920692.12.1e-07zinc finger protein ZAT12-like
SwissprotQ681X4.18.7e-06Zinc finger protein ZAT5
trEMBLA0A6I9R4X81.5e-07zinc finger protein ZAT12-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G28200.135.291e-2095.9C2H2-type zinc finger family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain366037.71.2e-09
PF13912.3zf-C2H2_6Domain8110434.71.1e-08

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0010200Presponse to chitin
GO:0044212Ftranscription regulatory region DNA binding
GO:0043565Fsequence-specific DNA binding
GO:0071289Pcellular response to nickel ion
GO:2000280Pregulation of root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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