Gene | Chr | Start | End | Strand |
---|---|---|---|---|
AfisC5G04464 | chr5 | 819260032 | 819287673 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | AGO33167.1 | 1.9e-99 | MYB transcription factor |
Swissprot | Q8RWU3.1 | 9.8e-53 | Protein LHY-CCA1-like 5 |
trEMBL | R9YZ62 | 1.4e-99 | MYB transcription factor |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT3G09600.1 | 46.07 | 4e-57 | 218 | LCL5;RVE8 | Homeodomain-like superfamily protein |
Species | Genes |
---|---|
Allium cepa | g478818.t1 |
Allium fistulosum | AfisC5G04464 |
Allium sativum | Asa0G04391.1 |
Arabidopsis thaliana | |
Oryza sativa |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF00249.28 | Myb_DNA-binding | Domain | 19 | 63 | 45.4 | 6e-12 |
Accession | Ontology | Name |
---|---|---|
GO:0005515 | F | protein binding |
GO:0001190 | F | transcriptional activator activity, RNA polymerase II transcription factor binding |
GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
GO:0005199 | F | structural constituent of cell wall |
GO:0005634 | C | nucleus |
GO:0009409 | P | response to cold |
GO:0009651 | P | response to salt stress |
GO:0009723 | P | response to ethylene |
GO:0009734 | P | auxin-activated signaling pathway |
GO:0009737 | P | response to abscisic acid |
GO:0009739 | P | response to gibberellin |
GO:0009751 | P | response to salicylic acid |
GO:0009753 | P | response to jasmonic acid |
GO:0009827 | P | plant-type cell wall modification |
GO:0009845 | P | seed germination |
GO:0009909 | P | regulation of flower development |
GO:0010243 | P | response to organonitrogen compound |
GO:0010600 | P | regulation of auxin biosynthetic process |
GO:0045893 | P | positive regulation of transcription, DNA-templated |
GO:0045892 | P | negative regulation of transcription, DNA-templated |
GO:0046686 | P | response to cadmium ion |
GO:0032922 | P | circadian regulation of gene expression |
GO:0042753 | P | positive regulation of circadian rhythm |
GO:0042754 | P | negative regulation of circadian rhythm |
GO:0043496 | P | regulation of protein homodimerization activity |
GO:0043565 | F | sequence-specific DNA binding |
GO:0043966 | P | histone H3 acetylation |
GO:0048574 | P | long-day photoperiodism, flowering |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |