result

Gene information

Detail information of AfisC5G04516

Location

Gene	Chr	Start	End	Strand
AfisC5G04516	chr5	828250818	828252556	-

Sequences

CDS

>AfisC5G04516
ATGAACTATACTAATTCTTTTGTACCTGTACAAGACATAGTCTTTCCCTTCTCCAAATTTCATCTCATACTCCTATCAATAGCATCATTCATCATACTCACAATTCTGAAAAACCGAAGTGGTAGCAAGGTCATATGGGACTGGCCGGTATTCGGTATGATTCCAACAATTATTGCAAACAATGACCGTCTACTCGATCATGCAGTCTCCATACTTCGAGATTTCAAACACACTTTACTGTTCAAAGGCCCATCGTTCATGAATGCAGATTTCATGCTTACTTGCGACCCTGAAAACGTCAACCACATTTACAACACACATTTCGACAACTACCCAAAAGGCGACGACTTCATACAAATATTCGATGTGTTAGGAGACGGAATATTTAATGCCAATGGAGAATCCTGGATGGTTCAAAGAAAAATGGCCCACACATATATGAGCGATAAAAGGTTCAAGTCCTACGTTGAGAAATGCACTAGAGAGAAGGTGTCTAACGTGCTCCTTCCTCTTATGAACCACTTCATGGAGCATGATCAAGTCGTTGATTTTAGCGATGTTTTCTTGAGGTTCACTTTTGATACCACGTCTGCTCTGGTCCTCGGTGTTGATCCAGGCTGTCTTCGTCCTGATTTTCCTACCATACCTTTTGAAGAAGCGTCCTCGTACATGGAAGAAGTTTTGCTTTTCCGGCACACTGTTCCCATGTTCTTCTGGAAGCTTCTGAACTGGCTGCAGATAGGCAAAGAGAGGAGAACGTCCGAGGCAACAGAGGTGGTAAATCATTTTATATATCGATGTATTCGAGAAAAAAGAGAAGCTCCTGCAGACAACTTAAAAGAAGGAGCTTTTGATCATCTCCTGACACCATATTTGAAACTAACCAAAAATAATTCAAATGATGCTTGTACATTCAGTGACAAGTTCATCAGGGACACTCTACTCACCTTCATTGCTGCAGGTAAAGACACAACATCATCCGTGATCATTTGGTTCTTTTGGCTAGTTTCCACTCACCCAAAGGTTGAAAAGAACATTCTGGAAGAGTTGAGAAAGCTGAAACCAAAATCTACCAAAATGGCAGTTTTAGAAGCTGAGGAGATGAACTCACTGGTGTACTTACATGCAGCAATATGCGAAACATTGAGACTGTACCCGCCCGTTCCTTTCAATCACAAACAACCTGTAAAAGACGATACATTACCAAGTGGACACAAAGTTTATAGAGGAATGAAAGTGATTGTATCGTCATATGCAATGGGGAGGATGGAGGGTATATGGGGAAAAGACTGCCTGGAATTTAAACCAGAAAGATGGATTACGGGAAAAGGGACGATAAGGCACGAGCCGTCGTATAAGTTCATTGCATTTCATTCTGGACCGAGGTCGTGTTTAGGTAAAAAAATGGCATTTACTCAGATAAAGTTGGTGGTTGCAGCTATGTTACACAACTTTGAAATTCATGCAGTTGAAGGCTACGTGGCCAGACCAAAGGTATCTATAGTTACTCAACCGAAGAATGGTTTGCCAATGAAGTTGAGAAAGAGAATGATGTTTGAAGACGTTAATGATCAGAAAATATGA

Protein

Gene

>AfisC5G04516
GAAATATGAACTATACTAATTCTTTTGTACCTGTACAAGACATAGTCTTTCCCTTCTCCAAATTTCATCTCATACTCCTATCAATAGCATCATTCATCATACTCACAATTCTGAAAAACCGAAGTGGTAGCAAGGTCATATGGGACTGGCCGGTATTCGGTATGATTCCAACAATTATTGCAAACAATGACCGTCTACTCGATCATGCAGTCTCCATACTTCGAGATTTCAAACACACTTTACTGTTCAAAGGCCCATCGTTCATGAATGCAGATTTCATGCTTACTTGCGACCCTGAAAACGTCAACCACATTTACAACACACATTTCGACAACTACCCAAAAGGCGACGACTTCATACAAATATTCGATGTGTTAGGAGACGGAATATTTAATGCCAATGGAGAATCCTGGATGGTTCAAAGAAAAATGGCCCACACATATATGAGCGATAAAAGGTTCAAGTCCTACGTTGAGAAATGCACTAGAGAGAAGGTGTCTAACGTGCTCCTTCCTCTTATGAACCACTTCATGGAGCATGATCAAGTCGTTGATTTTAGCGATGTTTTCTTGAGGTTCACTTTTGATACCACGTCTGCTCTGGTCCTCGGTGTTGATCCAGGCTGTCTTCGTCCTGATTTTCCTACCATACCTTTTGAAGAAGCGTCCTCGTACATGGAAGAAGTTTTGCTTTTCCGGCACACTGTTCCCATGTTCTTCTGGAAGCTTCTGAACTGGCTGCAGATAGGCAAAGAGAGGAGAACGTCCGAGGCAACAGAGGTGGTAAATCATTTTATATATCGATGTATTCGAGAAAAAAGAGAAGCTCCTGCAGACAACTTAAAAGAAGGAGCTTTTGATCATCTCCTGACACCATATTTGAAACTAACCAAAAATAATTCAAATGATGCTTGTACATTCAGTGACAAGTTCATCAGGGACACTCTACTCACCTTCATTGCTGCAGGTAAAGACACAACATCATCCGTGATCATTTGGTTCTTTTGGCTAGTTTCCACTCACCCAAAGGTTGAAAAGAACATTCTGGAAGAGTTGAGAAAGCTGAAACCAAAATCTACCAAAATGGCAGTTTTAGAAGCTGAGGAGATGAACTCACTGGTGTACTTACATGCAGCAATATGCGAAACATTGAGACTGTACCCGCCCGTTCCTTTCAATCACAAACAACCTGTAAAAGACGATACATTACCAAGTGGACACAAAGTTTATAGAGGAATGAAAGTGATTGTATCGTCATATGCAATGGGGAGGATGGAGGGTATATGGGGAAAAGACTGCCTGGAATTTAAACCAGAAAGATGGATTACGGGAAAAGGGACGATAAGGCACGAGCCGTCGTATAAGTTCATTGCATTTCATTCTGGACCGAGGTCGTGTTTAGGTAAAAAAATGGCATTTACTCAGATAAAGTTGGTGGTTGCAGCTATGTTACACAACTTTGAAATTCATGCAGTTGAAGGCTACGTGGCCAGACCAAAGGTATCTATAGTTACTCAACCGAAGAATGGTTTGCCAATGAAGTTGAGAAAGAGAATGATGTTTGAAGACGTTAATGATCAGAAAATATGATGAAGCATGGATTCTTGGTATAGTATATTATTTATGATGTAGTAACTCTATTTAAGTTTGTGTGTGATAGTAAACGTGTTATATTTCGTCTGTTAAGTTCTGCGTATACACAATATTATAGTTAACATTTTTAGTAAATATACGATGTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256136.1	1.6e-170	alkane hydroxylase MAH1-like
Swissprot	A0A140IL90.1	7.0e-118	Cytochrome P450 96T1
trEMBL	A0A5P1F8B5	1.2e-170	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23180.1	42.24	2e-117	419	CYP96A1	cytochrome P450, family 96, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04516	AT2G23180.1	483	260	5	47	516	36	512	42.24	2e-117	419
AfisC5G04516	AT4G39490.1	513	293	3	22	518	6	518	39.77	2e-112	402
AfisC5G04516	AT4G39500.1	469	265	2	53	516	1	466	41.79	2e-112	402

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	86	506	220.4	3.5e-65

Gene Ontology

Accession	Ontology	Name
GO:0005783	C	endoplasmic reticulum
GO:0005488	F	binding
GO:0055114	P	oxidation-reduction process
GO:0006631	P	fatty acid metabolic process
GO:0006950	P	response to stress
GO:0010025	P	wax biosynthetic process
GO:0010584	P	pollen exine formation
GO:0019438	P	aromatic compound biosynthetic process
GO:0044711	P	single-organism biosynthetic process
GO:0048608	P	reproductive structure development
GO:0080133	F	midchain alkane hydroxylase activity
GO:1901576	P	organic substance biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network