result

Gene information

Detail information of AfisC5G04528

Location

Gene	Chr	Start	End	Strand
AfisC5G04528	chr5	830599766	830601307	+

Sequences

CDS

>AfisC5G04528
ATGCAAGATATAGTACTTTCCGCCTCCAAAATTTATCTCATACTCCTATCAATAGCATTATTTATAATACTCACAATTCTGAAAAACCGAAATGGTAGCAAGGTGGTATGGGACTGGCCGATCCTAGGCATGATTCCAACAATTATTGCAAACGTTGACCATCAACTCGATCATTCAACCTGCATCCTTCGAGATTTCAAACACACTTTACTATTCAAAGGCCCATCGTTCATGAATGCAGATTTCATGCTTACATGCGACCCTGAAAACGTCAACCACGTGTACAACACACATTTCGACAACTACACGAAAGGCGATGACTTCAAACAAATATTCGACGTGTTAGGAGATGGAATATTCAATGCCAATGGAGAATCTTGGATGGTTCAAAGAAAATTGGCCCATACCTATATGAGCGATAGAAGGTTCAAATCCTATGTTGAGAAATGCACTAGAGAGAAGGTGTCTAACGTGCTCCTTCCTCTTATGAACCACTTCATGGAGCATGATCGAGTCGTTGATTTTAGCGATGTTTTCTTGAGGTTCACTTTTGATACTACGTGCGCTTTGGTCCTAGGTGTTGATCCAGGCTGTCTTCATCCTGATTTTCCTACCATACCTTTTGAAGAAGCATCCTCGTACATGGAAGAAGTTTTGCTTTTCCGACACACTGTTCCGATGTTCTTCTGGAAGCTTCTGAACCGGCTGCAGATAGGGAAAGAGAGGAGAACGTCGGAGGCAACAGAGGTGGCAAATCATTTTATATATCAATGTATTCGAGAAAAAAGAGAAGCACCTGCAGACAGCGTAAATGAAGGACCTTTCGATCTCTTGACGCCATATTTGAATAATGATGCTTGTACATTCAGCGACAAGTTCATCAGAGACACTCTACTCACTTTCATTGCTGCAGGTAAAGACACAACATCATCTGTGATCATTTGGTTCTTTTGGCTAGTTTCCACTCATCCAAAGGTTGAAAAGAATATTCTGGAAGAGTTGGGAAAGCTGAAACCAAAATCTACCAAAATGGTAGTTTTTGAAGCTGATGAGATAAACTCACTGGTGTACTTACATGCAGCAATATGCGAAACATTGAGACTGTACCCACCCGTTCCTTTCAATCACAAGCAACCTGTAAAAGACGATATATTACCAAGTGGACACAAAGTTTATAAAGGAATGAAAGTGATCGTATCGTCATATGCAATGGGGAGGATGGAGGGTATATGGGGAAAAGACTGCCTGGAATTTAAACCAGAAAGATGGATTACGGGAAAAGGGACGATAAGGCTCGAGCCGTCGTATAAGTTCATTGCATTTCATTCTGGACCGAGGTCGTGTTTAGGTAAAAATATCGCGTTTACTCAGATAAAGTTGGTGGTTGCAGCTATGTTATACAGTTTTGAAATTCAAGCAGTTGAAGGCTACGTGGCCAGACCAAAGGCGTCTGTAGTTACTCAACCAGAGAATGGTTTGCCAATGAAGTTGAAAAGGAGAACGATGTTTGAGGGTGTTGATCGTAAATATGATGAGGAATGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256136.1	6.1e-170	alkane hydroxylase MAH1-like
Swissprot	A0A140IL90.1	1.3e-116	Cytochrome P450 96T1
trEMBL	A0A5P1F8B5	4.4e-170	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23180.1	41.63	2e-116	416	CYP96A1	cytochrome P450, family 96, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04528	AT2G23180.1	478	265	3	38	501	36	513	41.63	2e-116	416
AfisC5G04528	AT4G39490.1	515	287	5	11	502	4	518	39.81	2e-111	399
AfisC5G04528	AT1G57750.1	498	294	4	11	500	8	496	37.55	1e-108	390

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	78	481	217.4	2.8e-64

Gene Ontology

Accession	Ontology	Name
GO:0006952	P	defense response
GO:0005783	C	endoplasmic reticulum
GO:0005488	F	binding
GO:0055114	P	oxidation-reduction process
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0010025	P	wax biosynthetic process
GO:0010345	P	suberin biosynthetic process
GO:0042761	P	very long-chain fatty acid biosynthetic process
GO:0045229	P	external encapsulating structure organization
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048827	P	phyllome development
GO:0080133	F	midchain alkane hydroxylase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network