Gene information

Detail information of AfisC5G04623

Location

Gene	Chr	Start	End	Strand
AfisC5G04623	chr5	845094519	845095334	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010940962.1	4.5e-65	dehydration-responsive element-binding protein 2E-like
Swissprot	Q10R18.1	4.2e-52	Dehydration-responsive element-binding protein 2E
trEMBL	A0A6I9SCF3	3.2e-65	dehydration-responsive element-binding protein 2E-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G57600.1	43.90	4e-54	207		Integrase-type DNA-binding superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04623	AT3G57600.1	287	100	9	8	251	3	271	43.90	4e-54	207
AfisC5G04623	AT1G75490.1	74	18	0	16	89	25	98	75.68	9e-30	127
AfisC5G04623	AT2G40340.1	91	37	0	16	106	55	145	59.34	2e-28	122

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	32	81	50.1	2.2e-13

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009873	P	ethylene-activated signaling pathway
GO:0010017	P	red or far-red light signaling pathway
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0010286	P	heat acclimation
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0034605	P	cellular response to heat
GO:0042542	P	response to hydrogen peroxide
GO:0043565	F	sequence-specific DNA binding
GO:0045595	P	regulation of cell differentiation
GO:0048316	P	seed development
GO:0071472	P	cellular response to salt stress
GO:0071497	P	cellular response to freezing

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network