Detail information of AfisC5G04626


Location
GeneChrStartEndStrand
AfisC5G04626chr5845828634845829233+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_021845042.14.3e-23AP2/ERF and B3 domain-containing transcription factor At1g50680-like
SwissprotQ9AWS7.11.8e-18Putative AP2/ERF and B3 domain-containing protein Os01g0140700
trEMBLA0A1U7ZA235.9e-22AP2/ERF and B3 domain-containing transcription factor At1g50680-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G50680.139.317e-23 103AP2/B3 transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag298781.t1; g43529.t1
Allium fistulosumAfisC5G04626
Allium sativumAsa6G04840.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family6416271.53.9e-20

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0009536Cplastid
GO:0009908Pflower development
GO:0010073Pmeristem maintenance
GO:0010358Pleaf shaping
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019760Pglucosinolate metabolic process
GO:0043565Fsequence-specific DNA binding
GO:0080113Pregulation of seed growth
GO:0080167Presponse to karrikin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09287RAV; RAV-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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