Detail information of AfisC5G04698


Location
GeneChrStartEndStrand
AfisC5G04698chr5860094185860095170-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrATO92533.13.8e-112cycling dof factor
SwissprotQ9LSL6.11.8e-29Dof zinc finger protein DOF5.7
trEMBLA0A2D1PH032.8e-112Cycling dof factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G65590.134.812e-37 152SCAP1Dof-type zinc finger DNA-binding family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag190726.t1
Allium fistulosumAfisC5G04698
Allium sativumAsa6G04133.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02701.12zf-DofFamily4498112.85.3e-33

Gene Ontology
AccessionOntologyName
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0010200Presponse to chitin
GO:0010227Pfloral organ abscission
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0048364Proot development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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