result

Gene information

Detail information of AfisC5G04747

Location

Gene	Chr	Start	End	Strand
AfisC5G04747	chr5	866484949	866488045	+

Sequences

CDS

>AfisC5G04747
ATGGCTACATTATATCCTGACATCAACCAAAGAGAAGACAGCTTACCAAATATTTATGTAAGAGATTCAAGTCAAATCCCATATCAGGAATCCTCTGTTCAAGAAAATATGCATTATGTTAACTTCGTATCTTCAGCTCCATACGCAGATTCATCAGCAATTACTACTCTACCCCAACAAGAATTATACCTGCAAGACCCGTTCATGTCAAGAGGACATAATAGTAATGCTATGTTACCAAACATTTCCAGGAATTTTCATTGCTTGAACTCTTTAGATTTATCTTCAGGACAAACAAATGCGACGTCTTTTAGCCTAGATATGCAAACTCCAAAACATTCGAGTTATTTTCGTAATTTGAAGTATTTGAAGGCAGCTCAACAACTGCTTGATGAACTTGTTAATGTTCAGAGTTGTAACAAGAAAAGAAAGGATGCTGATAAAGGATCGAATCATGATGCTAAGGTATTGTACAATACTCAAGATTATATGAATAATTCTTCTAATGAGATATCAATATTGGAGAAGCAAGAGCTACAGTGTAAAGTGGAGAAGCTACTGACTATGGTTGATCAGCTTGAGCAAAGATACAAGCAATATAGAAATCAAATACATACAATCAGCATATCATTTGATGCACTAACTAGACCAGAGTCATCTAAACCATACACAACACTAGCACTTCAAACAATTTCAAGCCAATTTCGATGCTTGAAAGATGCAATCACATCTCAAATAAGTAGCATTCGGAGAAAGCTAGGAGAACAAGTCATGAGATCAAGTGAAAAAGGAGTGGGAATTTCTCGCCTTCGCTACATAGATCAGAAAATAAGGCAAGAAAGAATACTGCAGCAGTTTGGTATGATGCAGTCAAATGTATGGAGGCCACAAAGGGGACTGCCTGAAAATTCAGTTTCAGTTCTTCGTGCTTGGTTATTCGAGCATTTTCTTCATCCTTACCCAAAAGACTCTGAGAAGCTAATGCTCGCAAAGCAAACAGGATTAACAAGAGGGCAGGTGGCAAATTGGTTCATAAATGCAAGAGTTCGTCTGTGGAAGCCAATGATAGAAGAGATGTACCAAGAAGAAATTGGTGATGCCGAAAACCAATCCAACTCATCCTCGGACAAACCACCAAAACTTCTTGAAGAAACAAAATGCAACAAAGAGAATGAAGACGAATGCAAATCAAATTCCATTGCAAATGCGAACTTAAGTGCAAAAGATGGATATACAAATCTTAAGTTGAGCGAACAGATGCCTCGCATTGAAAACAATGTCGGTGGTGTGTACGAAAATGAAAGGCAGATGGTTCCTTATCAAATGACTGAAATGAGTAGGTTTGCAAATGGAGTTTCTCTGACTTTAGGATTGCAGAACTGCGACGTTGGTCTTCAGAATTTGGAGGAAGAATTTGAATACATCAATGTACCATTGCATATGATGAATGATTTTGTTGCTTAA

Protein

Gene

>AfisC5G04747
GAAAATATTAGGTAGACGATATGCATAGTTTATAAATATTCTTTAATCCCATGCCCATATGAAAAGAGCTTGTTGTTTTTTAATTCTTGGGATTAGCTTATTGTCTCCATATTGGGAGTATTCCCTTCAGAGAAATTCTTGCTTTTCTTCTCTCATCTTAAATTCGGTAATCATTTTGTATTTTAAACATCTATATCTAAATTTATAAATCATTGTCATCTTCCTCGTATCCTTAAATTCCTTCTTCTTCGAGGTATGAATAATTTTAAGCTGATTTATAGTACATGTCTTAAATATTGTAGTATAAGATGTTTGAATTTGATGATTAACATGGGTCGTGTTTTTTGCATCACTGATTTAAAATATGAAACGAAAGAAGTTTGAGTAAATCCAACAAATATAGAAGACTACATGTATCTTAGCTTGAAAATTAATTATTTTTGTCGAAGAAATTATGTTAGCATGCTTAATTCTTATAGTTTTTCTTCTTCTATTAGTTAGCCTACTTTGTCAAGAAAGATAAAATATGTTGTTGTTATAAATTTGCAAACTATCTTCAGTTCTACCAGGGAATGCTTCATATAAGTGTACACCTGTTTACTAATCCTTTTTTCTCTTTTTATTTTTAGAGTTTTTTATTGCTAATTACTCTAGAGAAGGCAAGAAAATGGCTACATTATATCCTGACATCAACCAAAGAGAAGACAGCTTACCAAATATTTATGTAAGAGATTCAAGTCAAATCCCATATCAGGAATCCTCTGTTCAAGAAAATATGCATTATGTTAACTTCGTATCTTCAGCTCCATACGCAGATTCATCAGCAATTACTACTCTACCCCAACAAGAATTATACCTGCAAGACCCGTTCATGTCAAGAGGACATAATAGTAATGCTATGTTACCAAACATTTCCAGGAATTTTCATTGCTTGAACTCTTTAGATTTATCTTCAGGACAAACAAATGCGACGTCTTTTAGCCTAGATATGCAAACTCCAAAACATTCGAGTTATTTTCGTAATTTGAAGTATTTGAAGGCAGCTCAACAACTGCTTGATGAACTTGTTAATGTTCAGAGTTGTAACAAGAAAAGAAAGGATGCTGATAAAGGATCGAATCATGATGCTAAGGTATTGTACAATACTCAAGATTATATGAATAATTCTTCTAATGAGATATCAATATTGGAGAAGCAAGAGCTACAGTGTAAAGTGGAGAAGCTACTGACTATGGTTGATCAGGTGCATATTCCTAAACTCAAAAGATCGAACATAGTTTTTTTTTTTCTGTTAAAACACAAACTGTTGATGTTATAATAGATCAAAAATGGTTAAACCATCCTATCACCATATATGGACAGTTCTACATTTTTCTGTAATTTAAGACAAAAAACGTTCTATAATTATAGTTAGTGCTAAAATTTGAATTTAAATAGCATTTCAAAATAAGTGTTTTAATCTAAAAAATAAAATTGTGCAGCTTGAGCAAAGATACAAGCAATATAGAAATCAAATACATACAATCAGCATATCATTTGATGCACTAACTAGACCAGAGTCATCTAAACCATACACAACACTAGCACTTCAAACAATTTCAAGCCAATTTCGATGCTTGAAAGATGCAATCACATCTCAAATAAGTAGCATTCGGAGAAAGCTAGGAGAACAAGTCATGAGATCAAGTGAAAAAGGAGTGGGAATTTCTCGCCTTCGCTACATAGATCAGAAAATAAGGCAAGAAAGAATACTGCAGCAGTTTGGTATGATGCAGTCAAATGTATGGAGGCCACAAAGGGGACTGCCTGAAAATTCAGTTTCAGTTCTTCGTGCTTGGTTATTCGAGCATTTTCTTCATCCGTAAGCTGTTTAATTTTGAAAGAATTCTCGGTTGTGTAGTACTTCCTAAAAGATCTTTATTTTATAATTCCATGATTTTTGTTGTGGGTTTTTTGTAGTTACCCAAAAGACTCTGAGAAGCTAATGCTCGCAAAGCAAACAGGATTAACAAGAGGGCAGGTACAATTTTTTTCCTCTTTTCTTTGTATCAAGGAAATTTTCTACACTACTAAACAGAATTACAACAATTCATGATGTCATTTTCTCTCTATGATGCTTTACAATAAAATACTTAGTTAGATCCATGTTTCATAACAAAGGTGGCAAATTGGTTCATAAATGCAAGAGTTCGTCTGTGGAAGCCAATGATAGAAGAGATGTACCAAGAAGAAATTGGTGATGCCGAAAACCAATCCAACTCATCCTCGGACAAACCACCAAAACTTCTTGAAGAAACAAAATGCAACAAAGAGAATGAAGACGAATGCAAATCAAATTCCATTGCAAATGCGAACTTAAGTGCAAAAGATGGATATACAAATCTTAAGTTGAGCGAACAGATGCCTCGCATTGAAAACAATGTCGGTGGTGTGTACGAAAATGAAAGGCAGATGGTTCCTTATCAAATGACTGAAATGAGTAGGTTTGCAAATGGAGTTTCTCTGACTTTAGGATTGCAGAACTGCGACGTTGGTCTTCAGAATTTGGAGGAAGAATTTGAATACATCAATGTACCATTGCATATGATGAATGATTTTGTTGCTTAAGCTGGAGTATTTTTGTGTTACAGACATAAGAAAGGGTGTAGTTGATTTGGTAGAGAACGAAACGTTGACGATGATAATAATGTATAGTGAATGGTTGGTTTGAGATAGAGAGATCAGTGGAGGATATACTCATATACATAAGGTAGGATTATGTTAATATTAAAGGGATTGTCAAATAAATTTTGGTTTCTCAATCATGGTTTGTGAAGTTTCAACATTTTTTAACTCCTGCTAAAATTGAGCATATCCGTCAGCTGCTCCAATACCAATTTAACTTCCAAGAAATAGTACACGGTCTTCTAAATTTACGGGTAAAAACTTACCCCATAAAGAGAAGTGTGGAAGTCATGTATGAAACTTGTGTACAGATCCCACGCTGCTTTTCTTATGGCTAAAGTTTTATTTTAAATTTGGAAGATGTTTTTGTTAACTTCCACTCCATATATGCCATCTGAATAAAGACAGGTGTATGGTGGACAAGCACTTATCT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020578415.1	1.2e-95	BEL1-like homeodomain protein 7
Swissprot	Q9SIW1.1	6.0e-79	BEL1-like homeodomain protein 7
trEMBL	A0A2I0BCN9	2.2e-94	BEL1-like homeodomain protein 7

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G16400.1	46.21	9e-88	321	BLH7	BEL1-like homeodomain 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04747	AT4G34610.2	350	152	7	119	461	143	477	50.29	7e-88	321
AfisC5G04747	AT4G34610.1	350	152	7	119	461	143	477	50.29	7e-88	321
AfisC5G04747	AT2G16400.1	396	160	11	117	487	115	482	46.21	9e-88	321

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07526.8	POX	Domain	118	243	122.0	2.4e-35
PF05920.8	Homeobox_KN	Family	311	350	60.5	9.7e-17

Gene Ontology

Accession	Ontology	Name
GO:0000977	F	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0051015	F	actin filament binding
GO:0003785	F	actin monomer binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0046983	F	protein dimerization activity
GO:0008285	P	negative regulation of cell proliferation
GO:0009640	P	photomorphogenesis
GO:0010076	P	maintenance of floral meristem identity
GO:0010077	P	maintenance of inflorescence meristem identity
GO:0010223	P	secondary shoot formation
GO:0010227	P	floral organ abscission
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0010229	P	inflorescence development
GO:0010371	P	regulation of gibberellin biosynthetic process
GO:0015629	C	actin cytoskeleton
GO:0015630	C	microtubule cytoskeleton
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0080006	P	internode patterning
GO:0090470	P	shoot organ boundary specification

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network