result

Gene information

Detail information of AfisC5G04804

Location

Gene	Chr	Start	End	Strand
AfisC5G04804	chr5	877800415	877803920	-

Sequences

CDS

Protein

Gene

>AfisC5G04804
CTTTACTTCATAATTTATCCGACTCCATTCAAATTCCCGCAATCGATCTCGTTATCTTTTTGCAAACGCACAATTCAAAATCACAGTCCTTCGCCAAATTCTTCACTTCTGGTAATCAAATTTCCTCAAATCCCCATTTCCATTTCGCCGTTTTTACACTGCCCACCAAATCATAGTGCAATCTTGAATCCAATCCACAGTAGAACTTTTCATGGATTCTCTTTCTGGTAACATAAAGCAAGAAAACCTAAGTGCTAGTTCTTCTAGCTATGACGCACCACAACCAATGGAAGGATTGTATGAAGTAGGCCCGCCTCCGTTTCTGACGAAGATTTACGACATAGTGGACGATGCGAGCAGCAACGAGATTGTTTCATGGAGCTCTGCTTGCAATAGCTTTGTTGTGTGGGATCCGCATGCTTTCTCTATGTCTATGCTGCCCAAATACTTCAAGCATGGCAATTTTTCGAGTTTTGTTAGACAGCTCAACACTTATGTAAGTGTTTTGGTGTAATGCTTTTATCTTTTTTTCAGTTTAACTTCGATTTTGTTCTAAGATATTTACTGTGAATTTTACCTGATTATAAATAGACTGCTGATAACTCTTAATCAGTTAGGAACTTCGTATCCTCAGATTTGCAGTATTGAGTGGCATCACATCAGCAATATGAGATTTTAGCCCCCTGTATAGCTTTTAGCTGTACTTTTAACTAGTTTTGATTGTTTACATGTTCTCTCAATTTGCATTTGCAAGTTCTTGATATTTTATACTAACGTTATCCATTAGAATGGCATTCTAGCTGATGATTGATGATGTGATGATTGGTTAGGAATATGCAACTACAGAGCAGTATTTCATATTACTGTTACATTTTCTTTCTTCATATGGTAGCTTTTCAAATGTTAATTTATTTACGATGTTCTTTTCTTTAGGTGAATAACACTAATTGTGTTATCACATAGCTTAGGAATATATATTTATATAATGAAAAAGTAAATTCGTGCATTCTATGTATCATATTGATTCTTGTTCAATATTTTGTCAAGATTAACTTTGTTATCACAATAGTTTCTCAACCATATGGGACTTTATAGTTGAAAGAAATGCCTCTAGTGTATCTTTTGCTCTATTATCTCAATATGCTAAATGGGGTACTCGCTTTCTTTTTGCCATCTCGCCAAAAAGCTAAAGTTTCTTCTTCCTACTTTTGATCGGGTATTCAATAGACATTTAATTTAGATGGGAGCCATCAAAATTTAATCCAGCTTTCAAGGGTCCCTAACAAGATCAATAATTTTGAAGGGTCCCCATCGAAAGCTATAATTTTGTGCTCCATCATATGTTTTGTGCTGCATATGCTTTTCCCACCACTTGTGCTTCCTTCCTCTGCACTGTATCATTCATTTTAAAACAAAACCTCATTTTCTATGGGTCCCCATAAAAATCTTATATTTTCGGCCTTGGTAAATATGTTGTGCTGAACTTGCTTCTTCCATATATTGTTTTTTCTTTTTAAGTATCTTATCGCACATTTTCAATGTAGTACTGTACCGACAAATTTCATTTAATAATTATATGCAGGGTTTTAAAAAGGTGGATCCAGACAAATGGGAATTTGCAAATGAAGGTTTCCTCAAAGGCCAAAAGCATCTACTTAAAAGCATAAAAAGAAGAAGAGCACCTCCAAATCCACCTCATAAACTGAAATCCATGAACTCAAGTCTAGAGATTGGAAACTTTGCATTAGATGGAGAAATCAACATGCTTAAAAGGGACAAAAGCGTACTAATGGCAGAGGTAATCAAGCTTAGGCAAGAGCAACAAAACACCCGAGATCACATCCAAGCCATGGAAGAAAGAGTGAAAGAAACCGAGAAGAAGCAACAGCAAATGATGACTTTCATAGCAAGAGCAATGCGAAATCCAGACTTTCTGCAGCAGTTGCGAAGTAAAGAGGTTGAAGAAGCTATCATGAGGAAAAGAAGAAGACCAATAGAGTTGGAAACCAGCAATGTCGAACCAGAAGAACTGTTGGAAATTGAAGGGCAGGAAATGGAATATTTAGACCCTTTGGGTGCAAATGATTTGGAAGGCTTGGATGTTGAGATTGAAGGATTGAATGATGATGAGGTTGAGGGATTGAAAGGTAACGAAGAGCTTCAAACGATAAATGGATATGGCGACTCCGGGTTGTTCGATGAGTTCTGGAAGGAGCTGATGAGTGATGAGGATATTGCGCCAAAATAGACATTCATGAGCCACTGCTTCTCTCCTGCATATTAGTATTCTCAGTTTGTTTTTATTGCTGCTTGATGATTTTGGTAAAATCTTATTTCTTTCTATATGCAGGGATGAAGAATATTGGTAGTAGAATTGAAGAAGAGACTTGTTTGTATCCTTTTGTATCATTAGAAATGTTCGACTGTACATCAGTCTTGTTCATTATAATTGAATTTTTTTTTCCCTAATACGTTTCATTCTTTCAGATTCGAAGATTGCAACTATTCCATCTTTAGAAGTTTACAAGTTTGTGGCTCTTCGGTCATTCATAACTTGGTATGCAGTTCATCACTTTTTGTCTATATTATGCACTGAACTGGTAAATATTCTGGTAACATGGGAGCCATGCATAAGAGTTGTTCATGTTGACATATATCGTGTTTAAACTTTCATCTTTCCGATGATGATTGAAGGTTGTTTTCTATTTACATGGATTGGTATTGAACAGAAAGTTATTGTTGTGGCAGCCCGAAGTAGCTAATAGTTCCTTGTGGATTAAGAAGATGCAACAAACTTGGGTTAAAATGGCTCTGTGATTTTCAGTCTCGCCATGTATATTCGCCATGTATATTGTGTTGAAGTAGCTTCTAGGTCAAAGTGGCTTGAGCTGTAGAAGTCAAACTTTATGTGATTTAACGAATATTTCTAAAGTCAAACTTTGAACCTTCAACTAACATGTTAATCTTTTCTATTTAAATTTATTAATCTTCGATATAAAAAATTCAATTGACCTATGAATGATTTCACACCGTATCATGACAACTGCTAGGTTAATTTGATTTATTCCACCAATTTAATTTATGACGCTTGTGATCTTGATAGAATATTCAAACTTATCCTTTGATTATGTATCATTACTTCTATATTCTTCTCATTTTCTTACATTATTTGGTTCAGCACACTTTTGATCTAAACTTGAATCATGTAAATTTTGTTTACTTTCCATTGCTTTATGAATATGGATCATATACTAGTTTTTCTTTATTACCGATTAACATGAGAAATTATTTTTATATTGAAAATCTGATTGCAACTTTTGAATAAGTCTTTTACACACACATAAGAAAAAAATAATAATTTACTAGAATTATCATATGTTTCATTGACTATTATAGGTGGGCATAAAATGTGTGATGTTGAAAGTTTTGGATTAGTACATAAATGATTGTTTTCATATGCATCATTTGTAACAATTTAGAACCACCAAGAATCTTTAATCTAATAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020277134.1	2.6e-94	heat stress transcription factor A-2e-like
Swissprot	Q338B0.2	3.2e-81	Heat stress transcription factor 6
trEMBL	A0A8B7D590	6.0e-85	heat stress transcription factor A-2b-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G22830.1	56.54	7e-81	297	AT-HSFA6B;HSFA6B	heat shock transcription factor A6B

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04804	AT3G22830.1	237	90	2	18	241	43	279	56.54	7e-81	297
AfisC5G04804	AT2G26150.1	213	82	3	23	233	31	235	56.81	9e-72	267
AfisC5G04804	AT1G32330.1	208	81	2	23	216	24	227	52.40	8e-62	234

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	37	126	106.8	5.9e-31

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005739	C	mitochondrion
GO:0005634	C	nucleus
GO:0042802	F	identical protein binding
GO:0009507	C	chloroplast
GO:0009644	P	response to high light intensity
GO:0010200	P	response to chitin
GO:0010286	P	heat acclimation
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0032268	P	regulation of cellular protein metabolic process
GO:0034605	P	cellular response to heat
GO:0034620	P	cellular response to unfolded protein
GO:0042542	P	response to hydrogen peroxide
GO:0071456	P	cellular response to hypoxia

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network