Detail information of AfisC5G04847


Location
GeneChrStartEndStrand
AfisC5G04847chr5888085534888124779-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241563.10.0e+00phosphoinositide 3-kinase regulatory subunit 4 isoform X1
SwissprotQ9M0E5.10.0e+00Vacuolar protein sorting-associated protein 15
trEMBLA0A6I9SDZ40.0e+00non-specific serine/threonine protein kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G29380.157.130.01654AtVPS15;VPS15protein kinase family protein / WD-40 repeat family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag496294.t1
Allium fistulosumAfisC5G04847
Allium sativumAsa6G04942.1
Arabidopsis thalianaAT4G29380.1
Oryza sativaLOC_Os02g55340.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain2929277.78.1e-22
PF02985.19HEATRepeat51454120.80.00027
PF00400.29WD40Repeat1041107731.22.4e-07

Gene Ontology
AccessionOntologyName
GO:0004674Fprotein serine/threonine kinase activity
GO:0005524FATP binding
GO:0005643Cnuclear pore
GO:0005770Clate endosome
GO:0005794CGolgi apparatus
GO:0006468Pprotein phosphorylation
GO:0006623Pprotein targeting to vacuole
GO:0006950Presponse to stress
GO:0009555Ppollen development
GO:0009846Ppollen germination
GO:0016236Pmacroautophagy
GO:0030242Ppexophagy
GO:0034271Cphosphatidylinositol 3-kinase complex, class III, type I
GO:0034272Cphosphatidylinositol 3-kinase complex, class III, type II
GO:0044763Psingle-organism cellular process
GO:0045324Plate endosome to vacuole transport
GO:0051716Pcellular response to stimulus
GO:0071561Cnucleus-vacuole junction
GO:0080008CCul4-RING E3 ubiquitin ligase complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08333PIK3R4, VPS15; phosphoinositide-3-kinase, regulatory subunit 4EC:2.7.11.1 Apelin signaling pathwayko04371
Autophagy - animalko04140
Autophagy - yeastko04138
Autophagy - otherko04136

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.