Gene information

Detail information of AfisC5G04864

Location

Gene	Chr	Start	End	Strand
AfisC5G04864	chr5	890568587	890569546	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008808223.1	8.3e-49	ethylene-responsive transcription factor ERF003-like
Swissprot	Q94AW5.1	6.0e-44	Ethylene-responsive transcription factor ERF003
trEMBL	A0A8B7CWN8	3.9e-48	ethylene-responsive transcription factor ERF003-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G25190.1	57.71	1e-48	188	ESE3	Integrase-type DNA-binding superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04864	AT5G25190.1	175	57	3	1	159	1	174	57.71	1e-48	188
AfisC5G04864	AT5G25390.2	91	26	1	6	88	5	95	62.64	7e-28	119
AfisC5G04864	AT1G15360.1	69	21	0	6	74	5	73	69.57	2e-26	114

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	7	56	45.5	5.9e-12

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005730	C	nucleolus
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009749	P	response to glucose
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009873	P	ethylene-activated signaling pathway
GO:0010017	P	red or far-red light signaling pathway
GO:0010143	P	cutin biosynthetic process
GO:0010166	P	wax metabolic process
GO:0010200	P	response to chitin
GO:0010286	P	heat acclimation
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding
GO:0045595	P	regulation of cell differentiation
GO:0051301	P	cell division
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network