result

Gene information

Detail information of AfisC5G04899

Location

Gene	Chr	Start	End	Strand
AfisC5G04899	chr5	895358045	895360823	+

Sequences

CDS

>AfisC5G04899
ATGTGTGTTGAAAAATTACAAGAGTCTGGGCAAGTTCCAGAAACAACAAATTTTGATAAGAGTCAAATGGAGAAAAGCTCCGATTTAGCACAAACACATCTTGCAGGAATATGTGAGGATACAGTATCCTTGGATGCAAAACAAAGTGATCTAGTAAATTTTAACCCAATCATTCGGTCTGGAGAATGGTCCGATATTGGTTGCCGCAATCACATGGAAGATACTCATGTTTGTATCTCGGACTTAGCTGAGAAATTTGGACATGATAGATTGAATGAAGAAGTTGTTTCTTTCTTTGGGGTCTTTGATGGTCATGGAGGAAAGGATGCAGCACAGTTTGTACGCGACAATCTACCTAGACTCATTGTGGAAGATGCAGACTTTCCTCTTAAACTTGAAAAGGTTGTTGCACGCTCCTTCATGCAGACTGATGCTAAGTTTGCTGAGTCTTGCTTGCTCGAGTCTTCCCTCTCTTCTGGCACCACTGCCCTCAGTGCCATGATTTTTGGAAGATCATTGTTAGTGGCGAACGCGGGGGACTGTAGAGCAGTCCTTTCAAGACTGGGATCAGCAATAGAGATGTCAAGGGACCACAGACCATGCTGCATGAAAGAAAGAAAAAGAGTAGAATCTCTAGGAGGCTACATAGATGATGGTTACCTAAACGGACAGTTAGGGGTCACCCGTGCTCTAGGCGATTTCCACATAGAAGGCATGAAAGATCCTACTGGATCGAACGGGCCCTTGAGCGGGCCCCTAAGCGCCGAACCCGAACTAAAGCTCATCACACTTACAAAAGAGGACGAGTTCTTGATTATAGGCAGTGACGGCATATGGGATGTATTTACCAGTCAGAATGCAGTGGACTTTGCCAGGAGAAGACTGCAAGAGCACAATGATGTGAAAACCTGCTGCAAGGAGATAGTTGAAGAGGCGGTTACCCGAGGGGCAATTGACAATTTGACGGTGATCATGGTTTGCTTTCATAACGAGCGGCCAGCTCAGATTTTGCTGCCGAGGTTGAGGGTGAGGAGGAGCATATCGGCTGAGGGGCTTAAGAGTCTTAGATTTTTGTTGGAAGGATGA

Protein

Gene

>AfisC5G04899
AAGAAACTAACTCCAAATTATATTTCAAATCGTACAGTAACACAAGTTAATTGGGAGCTTTATATGCTACTTTCTCTGCACCATAAATTTACTTCCAATTTTGCACTTTCAAGTCTCAACAACCCATCATTTCTCATTTTTTCTCTTAGAATCTGCAAATATTCCAAGAATCTTTGTTATAGTTTATTCTCTTTATAATTATACATATTTAGTCTTTGTTTGAATTGGTATCATTTATCTTAGCTTCTAAAAGAAGTCATGTGTGTTGAAAAATTACAAGAGTCTGGGCAAGTTCCAGAAACAACAAATTTTGATAAGAGTCAAATGGAGAAAAGCTCCGATTTAGCACAAACACATGTGAGTTTCTATTAATTCTGTTAGTTTGCTATACTTCAGTGTATATTTTCATGTCTTTGATTTATAATTGTTGAATTTGGGTTAGAAAGTAGATTCCATTATCATGAATGGTCTTCAAATTTGAAATACATAAGACATATGACTAATTTACGAATATTTTTCCTTTTCTAATGTTTAATCTTGGTTCAGGGAATTGAAATTTATTTATGTAACTAAGAAATAACCGCATACGATATGTTCTGTGTAATTCTGCTTTGAATTCAATAATATTTTCAGTTTTCTCGGAAATTTGATACAGCCGAAATTGTAGAACCTTAATCATTACTGAAAATATTGCTTTTGTGTAGATGTATACGTTTATGACAATGAAATAGGAACAGTGTATTTCTCTTCTAAAATAATGATTGAAGTTGTTGACTGATTTAGGATTATTGTAATAAACTATAAGCCTTCATAGTTCAAATTAATCTTCAAAAGCAGCTGGCTATGAAGACCTTAGACATCAAATCCAAGGAAACTACACACCTATAAAACATCATAATACTCGGCATATTTCTTAAATTTAATCGGGGTTTTTAAAATATGCAGCTTGCAGGAATATGTGAGGATACAGTATCCTTGGATGCAAAACAAAGTGATCTAGTAAATTTTAACCCAATCATTCGGTCTGGAGAATGGTCCGATATTGGTTGCCGCAATCACATGGAAGATACTCATGTTTGTATCTCGGACTTAGCTGAGAAATTTGGACATGATAGATTGAATGAAGAAGTTGTTTCTTTCTTTGGGGTAAGTCATGGTTAATGTGGATTCTGGACTATGTGATGTATGTTGAAATATAGCAATCTGGCAAAAATTTAGCAATCTGTTCATCCCAGTGTATGTAGTGATTGTTGTTTTTGGTTGTTATATTGATTAGGAAACTATGCATTTCCCTAACTGCTTCTTGTGTAATATATATTTGTGGAGGTCTTTGATTTTGTGGAAATGAAATAGCTTATAAGAATGTTTTGCTCAGGTCTTTGATGGTCATGGAGGAAAGGATGCAGCACAGTTTGTACGCGACAATCTACCTAGACTCATTGTGGAAGATGCAGACTTTCCTCTTAAACTTGAAAAGGTTGTTGCACGCTCCTTCATGCAGACTGATGCTAAGTTTGCTGAGTCTTGCTTGCTCGAGTCTTCCCTCTCTTCTGGCACCACTGCCCTCAGTGCCATGATTTTTGGAAGGTATTTCTTCTTTTGGCATCAGTGTAGATACTGCAATATATACTTGTCATTTAACAAAACTTCAAAGTCATCTATCTATAGGTTATATATAAACATAGCTTCACATAATGATTGTGTGTGACGACTAAAGCCGTGCAGTCATGTTGAACAATCTTCACATCTGTTTGTTTCCCTTCAGTAATTGAACTAAGCTTCAAAGTCTTCAGTGTGCCAATACCATGGTTTAAACTAGGTCGCTAAATAAAAGATCTCAGTGTCCTGAGTATTCAGTTGTTCCCCGCTTTTACTTACAAGTGTATTATGGTGGCAGATCATTGTTAGTGGCGAACGCGGGGGACTGTAGAGCAGTCCTTTCAAGACTGGGATCAGCAATAGAGATGTCAAGGGACCACAGACCATGCTGCATGAAAGAAAGAAAAAGAGTAGAATCTCTAGGAGGCTACATAGATGATGGTTACCTAAACGGACAGTTAGGGGTCACCCGTGCTCTAGGCGATTTCCACATAGAAGGCATGAAAGATCCTACTGGATCGAACGGGCCCTTGAGCGGGCCCCTAAGCGCCGAACCCGAACTAAAGCTCATCACACTTACAAAAGAGGACGAGTTCTTGATTATAGGCAGTGACGGCATATGGGATGTATTTACCAGTCAGAATGCAGTGGACTTTGCCAGGAGAAGACTGCAAGAGCACAATGATGTGAAAACCTGCTGCAAGGAGATAGTTGAAGAGGCGGTTACCCGAGGGGCAATTGACAATTTGACGGTGATCATGGTTTGCTTTCATAACGAGCGGCCAGCTCAGATTTTGCTGCCGAGGTTGAGGGTGAGGAGGAGCATATCGGCTGAGGGGCTTAAGAGTCTTAGATTTTTGTTGGAAGGATGATAATGTCTTTCTTTTTTCTTTTTGGGTGTTTGCTGTTTATGTGATTGCTGTTTATGTGAATGTTGGTATTAATTTATCACCAATTGCAATGAGGGTTGTGTATATGGTGGAACCAAGTATAAAGCAGTATATGTATATTGTGGTCCTTGTAAATAAGCTGCGTTGGTGCGTCTACTGCAACTATCACGCATCAGTAACCATCATATTAACAAAAAGGTTTGAACCCTCTGAGGTAACTTTATGAAGAAATTTGTAGTTTGTTTATATGTCCCATAAGCTTAATATGGTTTCTTCAAAACTGTAGAGAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020242328.1	2.2e-158	probable protein phosphatase 2C 27 isoform X1
Swissprot	Q69QZ0.1	2.1e-137	Probable protein phosphatase 2C 27
trEMBL	A0A8B7BZZ1	9.0e-146	protein-serine/threonine phosphatase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G25620.1	56.07	2e-108	389	AtDBP1;DBP1	DNA-binding protein phosphatase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G04899	AT2G25620.1	346	142	5	19	361	51	389	56.07	2e-108	389
AfisC5G04899	AT2G33700.1	313	139	4	50	361	75	378	52.40	1e-87	320
AfisC5G04899	AT3G51470.1	316	139	5	46	359	57	358	50.95	3e-86	315

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00481.18	PP2C	Family	67	320	222.2	8.1e-66

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005829	C	cytosol
GO:0004722	F	protein serine/threonine phosphatase activity
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0006470	P	protein dephosphorylation
GO:0009414	P	response to water deprivation
GO:0009737	P	response to abscisic acid
GO:0044699	P	single-organism process
GO:0050688	P	regulation of defense response to virus
GO:0061416	P	regulation of transcription from RNA polymerase II promoter in response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14803	PTC2_3; protein phosphatase PTC2/3	EC:3.1.3.16	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network