result

Gene information

Detail information of AfisC5G05002


Location
GeneChrStartEndStrand
AfisC5G05002chr5914949486914993060+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020242240.14.9e-293serine/threonine-protein kinase CTR1 isoform X1
SwissprotQ05609.15.3e-244Protein CONSTITUTIVE TRIPLE RESPONSE1
trEMBLA0A8D7BC501.1e-273(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G03730.164.100.0 817AtCTR1;CTR1;SIS1Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag197673.t1
Allium fistulosumAfisC5G05002
Allium sativumAsa6G05082.1
Arabidopsis thalianaAT5G03730.1; AT5G03730.2
Oryza sativaLOC_Os02g32610.2; LOC_Os02g32610.3; LOC_Os02g32610.4; LOC_Os09g39320.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF14381.3EDR1Family150353246.61.6e-73
PF07714.14Pkinase_TyrDomain479733239.63e-71

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0000077PDNA damage checkpoint
GO:0005515Fprotein binding
GO:0000287Fmagnesium ion binding
GO:0001666Presponse to hypoxia
GO:0002229Pdefense response to oomycetes
GO:0007010Pcytoskeleton organization
GO:0005829Ccytosol
GO:0004709FMAP kinase kinase kinase activity
GO:0004712Fprotein serine/threonine/tyrosine kinase activity
GO:0005524FATP binding
GO:0005730Cnucleolus
GO:0005769Cearly endosome
GO:0005789Cendoplasmic reticulum membrane
GO:0005802Ctrans-Golgi network
GO:0007050Pcell cycle arrest
GO:0007257Pactivation of JUN kinase activity
GO:0009314Presponse to radiation
GO:0009414Presponse to water deprivation
GO:0009651Presponse to salt stress
GO:0009658Pchloroplast organization
GO:0009686Pgibberellin biosynthetic process
GO:0009744Presponse to sucrose
GO:0009750Presponse to fructose
GO:0009788Pnegative regulation of abscisic acid-activated signaling pathway
GO:0010105Pnegative regulation of ethylene-activated signaling pathway
GO:0010182Psugar mediated signaling pathway
GO:0012510Ctrans-Golgi network transport vesicle membrane
GO:0042733Pembryonic digit morphogenesis
GO:0043065Ppositive regulation of apoptotic process
GO:0044822Fpoly(A) RNA binding
GO:0046777Pprotein autophosphorylation
GO:0048510Pregulation of timing of transition from vegetative to reproductive phase
GO:0071281Pcellular response to iron ion
GO:1900150Pregulation of defense response to fungus
GO:1900424Pregulation of defense response to bacterium
GO:2000031Pregulation of salicylic acid mediated signaling pathway
GO:2000035Pregulation of stem cell division
GO:2000069Pregulation of post-embryonic root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14510CTR1; serine/threonine-protein kinase CTR1EC:2.7.11.1 MAPK signaling pathway - plantko04016
Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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