Detail information of AfisC5G05075
| Gene | Chr | Start | End | Strand |
|---|
| AfisC5G05075 | chr5 | 928804137 | 928808709 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020241509.1 | 2.8e-07 | putative GATA transcription factor 22 isoform X2 |
| trEMBL | A0A2I0WPM0 | 2.4e-05 | GATA transcription factor 22 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G26150.1 | 39.42 | 8e-26 | 113 | CGA1;GATA22;GNL | cytokinin-responsive gata factor 1 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC5G05075 | AT4G26150.1 | 208 | 70 | 4 | 63 | 216 | 147 | 352 | 39.42 | 8e-26 | 113 |
| AfisC5G05075 | AT5G49300.1 | 119 | 65 | 2 | 97 | 215 | 27 | 138 | 39.50 | 1e-17 | 86.3 |
| AfisC5G05075 | AT3G06740.1 | 119 | 68 | 2 | 92 | 210 | 27 | 142 | 40.34 | 4e-15 | 78.2 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00320.24 | GATA | Domain | 108 | 141 | 58.4 | 3.4e-16 |
| Accession | Ontology | Name |
|---|
| GO:0000977 | F | RNA polymerase II regulatory region sequence-specific DNA binding
|
| GO:0001085 | F | RNA polymerase II transcription factor binding
|
| GO:0001228 | F | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
|
| GO:0003682 | F | chromatin binding
|
| GO:0005634 | C | nucleus
|
| GO:0005667 | C | transcription factor complex
|
| GO:0007623 | P | circadian rhythm
|
| GO:0008270 | F | zinc ion binding
|
| GO:0009416 | P | response to light stimulus
|
| GO:0009845 | P | seed germination
|
| GO:0030154 | P | cell differentiation
|
| GO:0045944 | P | positive regulation of transcription from RNA polymerase II promoter
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| - | - | - | - | - |