result

Gene information

Detail information of AfisC5G05171

Location

Gene	Chr	Start	End	Strand
AfisC5G05171	chr5	946223988	946225536	+

Sequences

CDS

Protein

Gene

>AfisC5G05171
CCTAGACCTGCATCTTTCCACCACTTTCTCCCAGATCACATCCAATTCCATCACATTTTATGCAACTTAACAATCATGGCAAGCAACCCCAACACTAACAAAACCACAAATTTCTCATCATCCTCTTCATCTTCCTCCTCTTCAAAATCCTACTCTTCTTCCTCATCCTCTTCATTTCTCCCTCTCCAAACCATGGACCGACTCCGTCAAAATCTCACCTTAACACCACTATATCCTACTCCTCCTCCTCCTCCTATTACCACCACCACCCATTTCCAAGATTTTTTCGGACTTTCCTCGAAAAACACTAGCAGCAACTACCGCAGCACTGCCTTGAGCTTGAATAACAGTATGGAGTTCGAGTACAATTTGAACTGCGGTGAAAACCCTAGTAACGTTGGCATTGTCAATGCAAATGATCATTTTGTTCCATCCGCAGCTTTCTCTGACTCACTGCACAACATCAGTTCTCCTCCCAACATTGATAGGCTCTTTTCACGGCCGGTGTTGGTTGATAATCCCATCGTCAATGCTGGCGGCGATAAAAGGAAGAAGCGTATGATGAAGAACAGAGAGTCTGCTGCTAGGTCAAGGGCTAGAAAACAGGCAAACTCTTCTTTACTTTTTCATCTATCTTTAATTCAGCATACACATTCACCTAACTTGTACGTGTACACTCATGTTCATACCGTGCTGTATAGAATTTCTATATGTAGTGCTGAAATGAGTATTTGTTTAGGCATTGGATTTATAACCTACTGCTTGATTCTAATCAGCTTTTTTTAAAGTAAAGTACAAGTATTGTCTCTGAGAAAATTGCTATAAAGTCTATGTTTCGGGTGGTTAGAAAATAGAAAAATTGTTGTCATCTTTACATCAAATATATAATTTGCACAAAGATTTATTAATGTTGTTAAATACAGGCATACACAAATGAATTGGAGGGGGAAGTAGCCCACTTAGAAGCAGAAAATGCAAACCTCAAAAAACAGCTTGGAGAGGTAATGAAGTTCTAATTTATTGAATTCATCGTATGATCGTTGATTGATAGCAAAATAGTGTATGTTTATGTACCATAAACTGTTTTCACTAACCTATCATGAGTCACCAAAACTTTACTGTACATATCAGCTTAGTTCATATATACTAGTAATAGTACAATTCATTTATGTACATGTTTCAGATCTCATGTGGTTATATATATGATACATGCAGGCACAAAGGGCATTGGCTGCTCAACACTCTTCAAGAAGGAGCGCTCTGCAAAGAACCTTAACTGCTCCATTTTAAGAAATATCATGTAAAATGTTTCCTTTTACGTACTATCTTTGTTATTTTGATCATGTACTGGGTGGGTGGTTGTGTATATATAGACAAGCAGTATGATTGTTCAGAAGTAGAAATATTAGTTTCCTCCTGCTAACTATCGAATCCAACTAAAATTTGATCCAAAAAGCAAACAGAAGTTGAGTGTTTGTTGCCTGAAAAGTTGAAACAATGCAAGAAGATGTGATATTGCTTTCCACCTGTATTTTTATGCTGCAAAAGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020262433.1	1.1e-17	protein FD
Swissprot	Q84JK2.1	6.3e-15	bZIP transcription factor 14
trEMBL	A0A4S8JWI1	2.2e-17	BZIP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G35900.1	37.82	4e-21	98.2	atbzip14;FD;FD-1	Basic-leucine zipper (bZIP) transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05171	AT4G35900.1	193	64	5	48	227	136	285	37.82	4e-21	98.2
AfisC5G05171	AT2G17770.2	73	25	1	155	227	124	195	64.38	2e-18	89.4
AfisC5G05171	AT2G36270.1	88	43	2	127	212	326	412	47.73	5e-14	74.7

Ortholog group

Species	Genes
Allium cepa	g204154.t1
Allium fistulosum	AfisC5G05171
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00170.18	bZIP_1	Family	156	204	59.0	3.2e-16

Gene Ontology

Accession	Ontology	Name
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009739	P	response to gibberellin
GO:0009911	P	positive regulation of flower development
GO:0010152	P	pollen maturation
GO:0010187	P	negative regulation of seed germination
GO:0010200	P	response to chitin
GO:0010255	P	glucose mediated signaling pathway
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043621	F	protein self-association
GO:0048316	P	seed development
GO:1900057	P	positive regulation of leaf senescence
GO:1903648	P	positive regulation of chlorophyll catabolic process
GO:2000028	P	regulation of photoperiodism, flowering

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14432	ABF; ABA responsive element binding factor	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network