result

Gene information

Detail information of AfisC5G05310

Location

Gene	Chr	Start	End	Strand
AfisC5G05310	chr5	980552940	980554054	+

Sequences

CDS

Protein

Gene

>AfisC5G05310
ATGACCACTCTTGTCTCTCCGTTCATTCCATTCATCCCTGCGAGATTAGGCTCCGCGACTAAGGAAGAGGCGAAGACCAATAGCGCCAGGCCGCCAGCACAGCATACAAAGCGGCTAGCGACTCCAAACTTTGACCGACGATGGCGACTCTATTGCGAGGGTGAATTGGTGACTCCAATCTGACAGCGACTCCAATTAGGCAGCAGTGCCGACTCCATCCATCAGTGCCGGCTCAAAAGGTAGTGTCATTAAAAATTGCCATCATAATTAATTAAATCTCAGGTTAGGGCATATAAAATTAGCTAGATTCCAAATAACAGTGACAAATACTCCTGATTAGGGGAGTTGAATGCGGTATCTGTAGTCTTTGGTAATTCTGTGTTACCATTTTAGGGCAATATACATGATATAAATTGTTTGGAAGCTCGTCGAAATCAAAAAAATTAGGTATTATTATAGGCTGATGGTAATTATATCAACATTCTGCCTAAACTATGTTTATTGTTGATCGGTAGTTGCTTTCGTTGCTTCTACTACACTTATACCATGTAGTATTGGCTGGGTTGCTATAGCAGAACAGACAACCGACGCTTAATGAAGTGACATTAGAAGAGTTTTTAGTGAGAGCTGGTGTTGTAAGAGAAGAAAACAACGTTAATGTTCAACACCAGTTGCAAGTTGTAAGTAGTAGAGCACAAGAGAGTAGCATGAATAATGGCAACTTTATGTTTTTTGGTAATGGTAACCAGGGACTCGATCTAGGGTTCGGTCAACATTCAAGTGGTGTAGGGACTGCTAGGCCTTATCAAGCACAGTTTCAAGGGGGAAGTAATGTGGATAATGGAAGAGGAAGGATGGTTGCGGTTGGAGATCAGGGTATGAATAATGGGTTGATGAATGGGGTATAGGGTTTGGGTGGAGTAACAGTTGAGACAGTTAGGTCCCCGGATGTGATTGGGAAGCCTAATGGAGATCTATCATCATTGTGGCCTGATCCGTATAATGTATTTGGGTCGGGTACAAGGGGTAGGAAATGTAGTGGATCAGTGGAGAAGGTTGTAGAGAGGAGGCAGAAGAGGATGATCAAGAATCATGAGTCAGCTGCTAGGTCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	QEO19195.1	1.5e-24	putative ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1, partial
Swissprot	Q9M7Q4.1	4.2e-16	bZIP transcription factor 36
trEMBL	A0A5C1YVF3	1.1e-24	Putative ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1 (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G45249.1	38.79	3e-19	91.7	ABF2;AREB1;AtABF2;ATAREB1	abscisic acid responsive elements-binding factor 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05310	AT1G45249.1	232	55	10	61	218	135	353	38.79	3e-19	91.7
AfisC5G05310	AT1G45249.3	232	55	10	61	218	135	353	38.79	3e-19	91.7
AfisC5G05310	AT1G45249.2	232	55	10	61	218	135	353	38.79	4e-19	91.7

Ortholog group

Species	Genes
Allium cepa	g280307.t1
Allium fistulosum	AfisC5G05310
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0001101	P	response to acid chemical
GO:0003677	F	DNA binding
GO:0007165	P	signal transduction
GO:0006351	P	transcription, DNA-templated
GO:0006950	P	response to stress
GO:0009628	P	response to abiotic stimulus
GO:0009725	P	response to hormone
GO:0009791	P	post-embryonic development
GO:0031323	P	regulation of cellular metabolic process
GO:0033993	P	response to lipid
GO:0048518	P	positive regulation of biological process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0071310	P	cellular response to organic substance
GO:1901701	P	cellular response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14432	ABF; ABA responsive element binding factor	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network