Detail information of AfisC5G05327


Location
GeneChrStartEndStrand
AfisC5G05327chr5984724079984724450+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPNY15886.14.9e-09GATA transcription factor 1-like protein, partial
SwissprotQ8L4M6.24.3e-10GATA transcription factor 3
trEMBLA0A2K3PKR63.5e-09GATA transcription factor 1-like protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G25830.146.591e-1681.3GATA12GATA transcription factor 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag424699.t1
Allium fistulosumAfisC5G05327
Allium sativumAsa5G01546.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain609448.73.6e-13

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0046872Fmetal ion binding
GO:0006351Ptranscription, DNA-templated
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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