Gene | Chr | Start | End | Strand |
---|---|---|---|---|
AfisC5G05398 | chr5 | 993035388 | 993040124 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020260668.1 | 5.3e-98 | growth-regulating factor 4-like |
Swissprot | Q6AWY6.2 | 5.1e-69 | Transcription activator GRF3 |
trEMBL | A0A5P1F0F3 | 3.8e-98 | Growth-regulating factor |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT3G13960.1 | 60.53 | 1e-38 | 157 | AtGRF5;GRF5 | growth-regulating factor 5 |
Species | Genes |
---|---|
Allium cepa | g396887.t1 |
Allium fistulosum | AfisC5G05398 |
Allium sativum | Asa6G05566.1 |
Arabidopsis thaliana | |
Oryza sativa | LOC_Os02g47280.1; LOC_Os02g47280.2; LOC_Os04g51190.1; LOC_Os04g51190.2; LOC_Os04g51190.3 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF08880.8 | QLQ | Domain | 7 | 41 | 58.5 | 3.5e-16 |
PF08879.7 | WRC | Domain | 70 | 112 | 72.5 | 1.6e-20 |
Accession | Ontology | Name |
---|---|---|
GO:0005886 | C | plasma membrane |
GO:0005739 | C | mitochondrion |
GO:0005773 | C | vacuole |
GO:0005829 | C | cytosol |
GO:0005524 | F | ATP binding |
GO:0005618 | C | cell wall |
GO:0005635 | C | nuclear envelope |
GO:0005794 | C | Golgi apparatus |
GO:0006355 | P | regulation of transcription, DNA-templated |
GO:0006995 | P | cellular response to nitrogen starvation |
GO:0008285 | P | negative regulation of cell proliferation |
GO:0009506 | C | plasmodesma |
GO:0009570 | C | chloroplast stroma |
GO:0009624 | P | response to nematode |
GO:0009631 | P | cold acclimation |
GO:0009739 | P | response to gibberellin |
GO:0009742 | P | brassinosteroid mediated signaling pathway |
GO:0044212 | F | transcription regulatory region DNA binding |
GO:0016036 | P | cellular response to phosphate starvation |
GO:0050826 | P | response to freezing |
GO:0019760 | P | glucosinolate metabolic process |
GO:0046686 | P | response to cadmium ion |
GO:0019904 | F | protein domain specific binding |
GO:0030912 | P | response to deep water |
GO:0043565 | F | sequence-specific DNA binding |
GO:0045309 | F | protein phosphorylated amino acid binding |
GO:0048046 | C | apoplast |
GO:0048364 | P | root development |
GO:0048366 | P | leaf development |
GO:0051365 | P | cellular response to potassium ion starvation |
GO:0061062 | P | regulation of nematode larval development |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |