result

Gene information

Detail information of AfisC5G05439

Location

Gene	Chr	Start	End	Strand
AfisC5G05439	chr5	1000907405	1000910172	+

Sequences

CDS

>AfisC5G05439
ATGAAATTACCAAAACGCCCATGGAAGCCGCTTGCTGCAAGGCACTGCTGCAGAGTCGAAGGCAATGTGGTCTTAGGAAACCTCAGCCGATGCAGACCCACACGTTCAGAGCTCTCGAAGAAAGTTCTAGAACTTTCCCCATTCAGCAAGCTGTCTTTTTCAGACAAAAGCAGTTCTATCTCCACTTCTTCTATGAGATTCAATGCAGATGATTTCGCAAATGCTTTTGGTGCTGGATTGATTGCATTTCAGTTGACCGAGTTGAGAGGTATAACTCATGATTTCTCGAGTAATTATTTGTTAGGGCAAGGAGGATTTGGGACTGTGCATAAAGGCTATGTTGATGACAAGATGCGGAGCGGGCTGAAGGCCCAAGCAGTTGCTGTGAAGTTGCTGGATATTGAAGGTTTGCAAGGACATAGAGAGTGGTTGGCAGAAGTGATATTTCTGGGTCAGCTCAGGCACCCACATCTTGTAAAACTGATAGGCTACTGCTGCGAGGATGAGGAGCGGCTACTTGTATATGAATTCATGCCTCGAGGAAGCCTAGAGAATCATCTGTTCAAAAGAATGTCTGTAACTCTGTCGTGGGGAACAAGACTAAAGATTGCCATAGGAGCAGCAAGAGGCCTTGCATTTCTACATGGTGCAGAGAAACCAGTCATTTACCGTGACTTCAAAGCATCGAATATCTTGCTTGATTCTGATTTTACTGCTAAGCTATCAGATTTCGGTTTAGCGAAGATGGGTCCAGAGGGAGAGGATACACATGTAACAACACGGGTTATGGGAACTCATGGCTACGCTGCTCCAGAATATATCATGACAGGGCACTTGACAACCAAGAGCGACGTGTACAGCTACGGCGTAGTACTTCTAGAACTGATAACAGGAAGAAGATCAATGGATAAACTGAGGCCAAAAAATGAACAAAAACTAGTAGAATATGCCAAACCTTACTTAACAAGCAGTCGCAGACTACGCTACATCATTGACCCAAGACTTCTGGGTCAGTACTCAATCAAGGGATCTAAAGTAGCGGCAGCTATAGCACTGCAATGCTTAAGTCCTAACCCAAAAGATAGGCCTAAAATGTCACAAGTGGTTGAAACGTTAAAAAGTGTACAGCATTTGAAAGATATGGCAGCTAGTAATGGGCTTTGGCCTGCTACACATGTTTCTGGTAGAAGTGTAATTTCTGTGAAAAGTAGGGTTGATAGTGTTGCTAAGGGAAGGGTCAAAGGAGGCGCTGTATCTGGGAAATTGGTTTGA

Protein

Gene

>AfisC5G05439
TCAACATCCATCTTCAATACATCTCCGCGCAAAAGAATGAAATTACCAAAACGCCCATGGAAGCCGCTTGCTGCAAGGCACTGCTGCAGAGTCGAAGGCAATGTGGTCTTAGGAAACCTCAGCCGATGCAGACCCACACGTTCAGAGCTCTCGAAGAAAGTTCTAGAACTTTCCCCATTCAGCAAGCTGTCTTTTTCAGACAAAAGCAGTTCTATCTCCACTTCTTCTATGAGATTCAATGCAGATGATTTCGCAAATGCTTTTGGTGCTGGATTGATTGCATTTCAGTTGACCGAGTTGAGAGGTATAACTCATGATTTCTCGAGTAATTATTTGTTAGGGCAAGGAGGATTTGGGACTGTGCATAAAGGCTATGTTGATGACAAGATGCGGAGCGGGCTGAAGGCCCAAGCAGTTGCTGTGAAGTTGCTGGATATTGAAGGTTTGCAAGGACATAGAGAGTGGTTGGTAAGTTGTTGATTTGTTTGTTTACATTATGGTATGGTTATGTGATTTTTTTATGGTCAGTGGAGTAGGCATAGCTTGTTTTGATTTCAAAACAAGGTATAATCATTGGTTTTCTTAGGTTTGATTGAATTTAGTTCATAGTTTAGGTACCTAGCATAGTCTATCATTGTTTACTGTTTATCTTAGAGGATTTAAGGGGAAAATAGGATTGATATTTTTATCTTCATAGGGAGGGGTAATTACTCAGCGCAGTACAAATATCATAGTCAAAATTTGATATCTTCCCTTAAATAGTAGTTCATCTGACCGAAGAATTGAGATGTAAATAAAATTATCATTCTCCTCGCTCCAACTGTGTAGATCTTATGACATATTTATTCAGAAGTTTATGAACAGTGTTTTGTTTGTCAATCTTCTCAATGTTAAAGAAAAAGGAAAAAGATGACTCAGGACAAAAGAAATCGCTAAACATGCACATGAGAAGATCTTTAGCCATTAATGTACACTCATGGTGTGAATTATATGACCATGATTTCAGGCAGAAGTGATATTTCTGGGTCAGCTCAGGCACCCACATCTTGTAAAACTGATAGGCTACTGCTGCGAGGATGAGGAGCGGCTACTTGTATATGAATTCATGCCTCGAGGAAGCCTAGAGAATCATCTGTTCAAAAGTGAGCGACCACTTATTTAATTTGCAGTGACAAACTCGAGGTTATTAACCAAAATCATAATTTATCACCGGTGATGTAACAGGAATGTCTGTAACTCTGTCGTGGGGAACAAGACTAAAGATTGCCATAGGAGCAGCAAGAGGCCTTGCATTTCTACATGGTGCAGAGAAACCAGTCATTTACCGTGACTTCAAAGCATCGAATATCTTGCTTGATTCTGTCTGTAACATAACTTGGCCCATATATTCAAATTACAACTTAACTCTGATTTCATTTTACTATGAATTTTCAGGATTTTACTGCTAAGCTATCAGATTTCGGTTTAGCGAAGATGGGTCCAGAGGGAGAGGATACACATGTAACAACACGGGTTATGGGAACTCATGGCTACGCTGCTCCAGAATATATCATGACAGGTAAAATCACACGATTTCTTAAAGGGCTGCTTTTAATAGTATCAATTTGGCTAAAGGAGAAATCTTCTTACTTTTTATTATTCAGCAATATGAACATGCGCCTTTTCAATTATTAATATTTGTGTTATTAATAAAAAAAAAACTATATTGTCTTAGACTATAAAATTCGATCCAAATGGGTATAATGATAAATTTATCTATTTCATTGCAAAGCACAAATAGTATAGAGAAGAACGGATTCAGATCACCTGATCATAAACTTATGTGTCTTCGGTCTACCCAGCAAATATGAATTCCCAAAAAATTTGTAAAAAAAGAAAGAAAAAAAATCACACATGAAAGTAAGATCGTCTTCTTGGTAGTTGGTTGGGCATGCCTTGACACATATGTTTTGGCCCTTTGGGACTAGGTTATTTGAACCTAAAAAGAATGTCATAGACTTGTATTTCTCTTTTTACTATTGCTGGAGGCAAAAAAGTTAGAACTTTTTAATACGAGTTTGGTTCGAAGAGACCCATACACGCAAAAAGTTCGATCAAGGGTTGTGGTTTTGCTCATAAACAGTTCCACCCTTAACCAAACTGTTACTGTCAATAACAACTTTTTTTTGAAATATACTAAAATTTGGTTGTTTGTTTTGTTACTTTTACTGTTTAAATTTTATCATATGTGAAATTTATCAGGGCACTTGACAACCAAGAGCGACGTGTACAGCTACGGCGTAGTACTTCTAGAACTGATAACAGGAAGAAGATCAATGGATAAACTGAGGCCAAAAAATGAACAAAAACTAGTAGAATATGCCAAACCTTACTTAACAAGCAGTCGCAGACTACGCTACATCATTGACCCAAGACTTCTGGGTCAGTACTCAATCAAGGGATCTAAAGTAGCGGCAGCTATAGCACTGCAATGCTTAAGTCCTAACCCAAAAGATAGGCCTAAAATGTCACAAGTGGTTGAAACGTTAAAAAGTGTACAGCATTTGAAAGATATGGCAGCTAGTAATGGGCTTTGGCCTGCTACACATGTTTCTGGTAGAAGTGTAATTTCTGTGAAAAGTAGGGTTGATAGTGTTGCTAAGGGAAGGGTCAAAGGAGGCGCTGTATCTGGGAAATTGGTTTGATTTAAAAGATATTTGGATGCCTTGGTTATAAAGAGAGTTATGTACAGGTTTCATGTATGCGATATTTGTGTATGAACTTTGGTG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263692.1	2.0e-182	LOW QUALITY PROTEIN: probable serine/threonine-protein kinase PBL15
Swissprot	Q9SY91.1	1.4e-156	PBS1-like protein 15
trEMBL	A0A6I9RVH3	1.8e-182	probable serine/threonine-protein kinase PBL15

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G61590.1	69.00	2e-163	572		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05439	AT1G61590.1	400	118	4	8	406	16	410	69.00	2e-163	572
AfisC5G05439	AT2G05940.1	336	111	1	46	381	41	373	66.07	3e-127	452
AfisC5G05439	AT2G26290.1	339	121	2	41	378	36	371	63.13	4e-126	448

Ortholog group

Species	Genes
Allium cepa	g336909.t1
Allium fistulosum	AfisC5G05439
Allium sativum	Asa6G00766.1
Arabidopsis thaliana	AT1G61590.1
Oryza sativa	LOC_Os03g24930.1; LOC_Os03g24930.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	100	372	163.3	5.9e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0042742	P	defense response to bacterium
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006468	P	protein phosphorylation
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network