result

Gene information

Detail information of AfisC5G05506

Location

Gene	Chr	Start	End	Strand
AfisC5G05506	chr5	1013532313	1013537007	-

Sequences

CDS

>AfisC5G05506
ATGAAAAGATTCAAATTTGCTTGCTTTTTACTATCAATAGCTCTATCATCGTCCTCTTTATTACTACTAGCAAGTGAACTTGATGATGTTTCATCTCTACTACAATTCAAGAAATCATCTATTCAACAAGACCCGAAAAACTTCCTACTCAATTGGACTAATTCTACTACCGTCTGTTCTTGGACCGGTGTCGTATGCTCTGATCTTGATGATACTCGAATTCATAGCTTAAATTTAAGCAATATGGGCCTAGTCGGGCGATTAAATCTCGATTACTTAATGTTCATACCTGATTTAGTCGAAGTCGATCTTCATGGTAACTTATTCTATGGCAATTTGTCGTCGTCATCTTCAAGTTCCATTACATTATGCAATATCCAAAAACTCGATATTTCATCCAATAATTTCTCAGAACCACTGCACAATAGTTTCTTTACTCCATGTTTTAGCCTTGTTTCTTTGAATTTATCGAGAAATTCGATCCCAGGTGCAAATTTGTCAACCATGTACTCTTCTATTCAAGTTCTGGACTTGTCAAGAAATCGAATTTCAGACAACTATTTTTTGAATTTTTACCTTTCAAATTGCCATAACATCAACTATCTCAACTTATCCGACAATAAGTTGACCGGGAAGCTTCCGGAAACTATCTCTAGTTCATGTTCTAACCTAACTATACTTGATTTATCGTTCAATCTCATATCGGGTCAAATACCTTCAAATTTTGTATCCAATGCAACAACTAGTCTACAACATTTAGACCTCTCTCATAACAACTTTTCAGGAGATTTTTCCAAGTACAACTTTGGAGAATGCAAAAGAATCACGACCATCGATATATCATCCAACTGTCTTAATGGAAGTAGCCTTCCATTGAGTTTAACCAACTGCAAGCTTCTAGAAACCCTTGCATTATCCAGTAACAATTTTAGCGGCCAGTTGCCTACTTTCTGGGCTAGCTTATCTAACTTGAAGCACTTATCACTGAGTGACAATAAATTTTCAGGGCAAATACCATATGAAGTTGGACATGCATGCAGGACCCTTATCGACTTAGACTTATCTGGAAATCAATTTATCGGTGAACTCCCAAATACATTCATCGGGTGCAGATTTCTTGAAAGATTAAACCTCGGCCATAATGGATTATCTGGAAACTTTGTTGAAGAAGTTATAAGTACAATTACAACTTTGAAATTTCTTTATATTCCATTTAATAATCTTTCGGGTTCACTTCCATTGAAGCCATTGACAAATTGTACCCTTCTTGAAGTTATAGACCTCAGTTCGAATGATTACTCGGGTGATATCCCAACCGGGTTTGGATTTTGCAAGTCCATCACTAACCTTACCAAGCTGATGTTTCCAAATAATTTGATAACAGGCAGCATTCCATCAGAGTTTGGCACATGCATAAATTTAAAATCAGTGGACTTTAGCTTCAACTACTTGAACGGCCCGATTCCTTCTGAAATATGGTCACTGCCGAAACTAACGGATCTGATAATGTGGGCGAATAACCTTGAAGGCAAAATTCCTGAAAATATATGCACTGATACAATAGCCATTTCGAATTTTGAGATGTTGATCCTTGGCTACAATAACTTATCGGGTAAGATCCCTGAGTCGCTTGCATACTGCACAAATTTAATATGGGTGTCTTTATCAGGTAATAAGTTTACTGGAAAAATCCCTGAAAGAATCGGAAACTTGAAGAAACTTGCAATACTTCAGTTGGGAAACAATGTATTGTCTGGTAATATTCCTCCTGATATTGGGAACTGTGAGAGTTTGATATGGTTGGATTTGACTAACAACTCGCTATCAGGTCCGATACCGGGTTCCATCGCTGCACAAACGGGTTTAATTGCACCGGGTATGGTATCTGGAAAGCATTTTGCTTTCTTGAGAAATGAAGCTGGAAACATCTGTCCTGGAGCAGGAGTTCTATTTGAATTCGAAGGTATCAGACCCGAAAGACTTTCAAATTTTCCAGTAGTGAACTCGTGTCCATCAACTAGAATATATACGGGTACGACTGTTTATACTTTCGGTGGCAATGGGAGCATAATATACATGGATTTGTCTTACAATCTTCTTAATGGGTCCATACCCTCTGAGTTTGGGCCTATGAAGTTCCTCCAAGTGTTGAATTTGGGCCATAACGAGTTAACGGGTGGGATACCGACGTCTTTTGGAGGAATGAAGACACTTGGTGTTTTAGATCTTTCTCATAATCAGCTGAGCGGGAACATCCCTGGTGATTTGGCTAGTCTATCTTTTCTGAACGATATGGATGTGTCCTATAATAATTTATCCGGCCCAATTCCCACCGGCGGCCAGTTCAGTACATTTTTGCCATCCAGGTATGATCACAATTTGGGTCTTTGTGGGGTCCCGTTGCCTCGGTGTGGGTCCGGCGATCCAAATTCAAATTCAAATTCAAGTTCAAAGGGAAGAAGAAGAATCTTTGGTGGTGGAAGTATGATAGTCGGTATAGTCTTTGCTTTCCTCATCATAGTCACACTACTTGTAGCGCTTTATAGAATCCGAAAATACCATAAAAACGGAGAAGGTAAGAATTCATATATTCAAAGTTTTACGGCTTCTGTCAGCACCAACGGCGGCGGCGAAACATCGAATTGGAAATTCTCGACCGACCCAGCAAAAATCACGTTAGAGACATTCGACAAACCATTAAGAAACTTAACGTTCGCGCATTTAGTGGAGGCCACAAACGGGTTCAGCCCGGACACCCTTATCGGGTCGGGCGGGTTCGGTGACGTCTTCAAGGCGAAACTCGGGGATGGGTCCACGGTCGCGGTCAAGAAGCTGGTTCGGTTCGCGGGCCAAGGAGACCGCGAGTTCACCTCCGAGATGGAGACCATTGGCAAAATCAAGCATAGAAACCTAGTGCCATTGCTAGGCTACTGCAAAGTGAACGAGGAACGGATCCTGGTGTACGAGTACATGAAGCACGGAAGCCTCGACGTGTCGATTCAAACCAAACGTCAGTCTCTGGACTGGGCCACGAGGAAGAAGATTGCGATAGGGGCGGCCCGTGGGCTTGCTTTCCTTCACCATAGCTGCATCCCTCATATCATACATAGGGACATGAAATCGAGCAACGTGCTGCTTGATGAAAATTTCAATGCACGGGTGTCGGATTTCGGGATGGCCCGGTTGATGAATGCCGTGGATACCCATTTGAGTGTGAGCACGCTAGCGGGTACGCCCGGGTACGTGCCTCCGGAATACTATCAAAGCTTTAGGTGCACCACCAAAGGGGATGTGTACAGTTATGGTGTGGTGCTTTTGGAGCTTTTAACGGGTAGGAAGCCCATCGACCCGTTGGATTTCGGGGATAATAACTTGGTGGGTTGGGCCAAGAATTTGGCGAAGGAGAATCGGAGTGGGGAAATATTTGATGGAGAGTTGATGGGGAGGAATTCGGGTGAGGGGGAGGTTTATAAGTGTTTGAAGATAGCGTTTGAATGCTTGGATGATAGACCGTTTAAGAGACCTACTATGATTCAGGTAATGGCTATGTTTAAAGAGATTGATCAAGCTGATTTTGATAGTGAGTTTTCTGATGCGTTTTCGATTGGGAAGTCTGTTATTGATGAAACTAAAGAGAAAGGGCCTTGA

Protein

>AfisC5G05506
MKRFKFACFLLSIALSSSSLLLLASELDDVSSLLQFKKSSIQQDPKNFLLNWTNSTTVCSWTGVVCSDLDDTRIHSLNLSNMGLVGRLNLDYLMFIPDLVEVDLHGNLFYGNLSSSSSSSITLCNIQKLDISSNNFSEPLHNSFFTPCFSLVSLNLSRNSIPGANLSTMYSSIQVLDLSRNRISDNYFLNFYLSNCHNINYLNLSDNKLTGKLPETISSSCSNLTILDLSFNLISGQIPSNFVSNATTSLQHLDLSHNNFSGDFSKYNFGECKRITTIDISSNCLNGSSLPLSLTNCKLLETLALSSNNFSGQLPTFWASLSNLKHLSLSDNKFSGQIPYEVGHACRTLIDLDLSGNQFIGELPNTFIGCRFLERLNLGHNGLSGNFVEEVISTITTLKFLYIPFNNLSGSLPLKPLTNCTLLEVIDLSSNDYSGDIPTGFGFCKSITNLTKLMFPNNLITGSIPSEFGTCINLKSVDFSFNYLNGPIPSEIWSLPKLTDLIMWANNLEGKIPENICTDTIAISNFEMLILGYNNLSGKIPESLAYCTNLIWVSLSGNKFTGKIPERIGNLKKLAILQLGNNVLSGNIPPDIGNCESLIWLDLTNNSLSGPIPGSIAAQTGLIAPGMVSGKHFAFLRNEAGNICPGAGVLFEFEGIRPERLSNFPVVNSCPSTRIYTGTTVYTFGGNGSIIYMDLSYNLLNGSIPSEFGPMKFLQVLNLGHNELTGGIPTSFGGMKTLGVLDLSHNQLSGNIPGDLASLSFLNDMDVSYNNLSGPIPTGGQFSTFLPSRYDHNLGLCGVPLPRCGSGDPNSNSNSSSKGRRRIFGGGSMIVGIVFAFLIIVTLLVALYRIRKYHKNGEGKNSYIQSFTASVSTNGGGETSNWKFSTDPAKITLETFDKPLRNLTFAHLVEATNGFSPDTLIGSGGFGDVFKAKLGDGSTVAVKKLVRFAGQGDREFTSEMETIGKIKHRNLVPLLGYCKVNEERILVYEYMKHGSLDVSIQTKRQSLDWATRKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENFNARVSDFGMARLMNAVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGRKPIDPLDFGDNNLVGWAKNLAKENRSGEIFDGELMGRNSGEGEVYKCLKIAFECLDDRPFKRPTMIQVMAMFKEIDQADFDSEFSDAFSIGKSVIDETKEKGP

Gene

>AfisC5G05506
GGGAGAATCAAATCCCAACTTTGACTCAACTTGAAACTTGAGTTACCAATTAGAATAATCAATTAACAAAACCCTAAAATTGTTTCCTTGATTCAATACTTTATCATTTCTCCTCTGTAGTTGCATTAATCTTTCTTTGTTTATTCCAGTAAATATCAAAACAAACCCCTCCTCAAACCCCACAAAATTATAAAAATCACTAATTATACGCTTAATTCTTTCTTCTTACTAACTTGTTATTCCATTCTCTGTTTCCCCTTCTTCATTCTTTCTTTGTTCTTCAAGCTTCAAGCTATATTTCTTCCCCTAAGCAGATACATAATATTTTTCATGTTGGTCTTCTGCCCTACTCCATAGAAGGATTTATGCATTTTCAAGCTCAGCAACAAGCTTTCAAAGGTTAGTATTTTTTATTCTTGTACTGATCATGTTATGAATTTTAAGAAACGTTTAACATGTTCACAATAAATTTGGATGAAGAAAATATTCTATAAATATTTTTAATTACAATAAATTCACCTTGCAATCACCTAGTGATCAATTGCATGTCCAAGTCTTGCAATAGTTTCTTAGTTATCTTCCATTTAAAAATAGCAGTAGTAATGTCGACGCAAGTTTTGTTTGCTTTTGTCAAAGTTGCAATTTGCTTGCTTAAGTTGATTTATCTCTTATTTGCAAACAGTTAGTCATATCTTAATACTAATTTGGGTGTGTTTTTTCTTGTCTTATTACAGATCACATCTACAAGACAAAACCATAAATGTGAGGAGCAATGTTTTAGAACCAGGCACAACAAGCTATGAAAAGATTCAAATTTGCTTGCTTTTTACTATCAATAGCTCTATCATCGTCCTCTTTATTACTACTAGCAAGTGAACTTGATGATGTTTCATCTCTACTACAATTCAAGAAATCATCTATTCAACAAGACCCGAAAAACTTCCTACTCAATTGGACTAATTCTACTACCGTCTGTTCTTGGACCGGTGTCGTATGCTCTGATCTTGATGATACTCGAATTCATAGCTTAAATTTAAGCAATATGGGCCTAGTCGGGCGATTAAATCTCGATTACTTAATGTTCATACCTGATTTAGTCGAAGTCGATCTTCATGGTAACTTATTCTATGGCAATTTGTCGTCGTCATCTTCAAGTTCCATTACATTATGCAATATCCAAAAACTCGATATTTCATCCAATAATTTCTCAGAACCACTGCACAATAGTTTCTTTACTCCATGTTTTAGCCTTGTTTCTTTGAATTTATCGAGAAATTCGATCCCAGGTGCAAATTTGTCAACCATGTACTCTTCTATTCAAGTTCTGGACTTGTCAAGAAATCGAATTTCAGACAACTATTTTTTGAATTTTTACCTTTCAAATTGCCATAACATCAACTATCTCAACTTATCCGACAATAAGTTGACCGGGAAGCTTCCGGAAACTATCTCTAGTTCATGTTCTAACCTAACTATACTTGATTTATCGTTCAATCTCATATCGGGTCAAATACCTTCAAATTTTGTATCCAATGCAACAACTAGTCTACAACATTTAGACCTCTCTCATAACAACTTTTCAGGAGATTTTTCCAAGTACAACTTTGGAGAATGCAAAAGAATCACGACCATCGATATATCATCCAACTGTCTTAATGGAAGTAGCCTTCCATTGAGTTTAACCAACTGCAAGCTTCTAGAAACCCTTGCATTATCCAGTAACAATTTTAGCGGCCAGTTGCCTACTTTCTGGGCTAGCTTATCTAACTTGAAGCACTTATCACTGAGTGACAATAAATTTTCAGGTAGTGCAAACTCTCTATATATATTTATCTTTCTGCCATACATACTTTTACTAGCTGTAAATAAAATTTACGTAATTTTCAGGGCAAATACCATATGAAGTTGGACATGCATGCAGGACCCTTATCGACTTAGACTTATCTGGAAATCAATTTATCGGTGAACTCCCAAATACATTCATCGGGTGCAGATTTCTTGAAAGATTAAACCTCGGCCATAATGGATTATCTGGAAACTTTGTTGAAGAAGTTATAAGTACAATTACAACTTTGAAATTTCTTTATATTCCATTTAATAATCTTTCGGGTTCACTTCCATTGAAGCCATTGACAAATTGTACCCTTCTTGAAGTTATAGACCTCAGTTCGAATGATTACTCGGGTGATATCCCAACCGGGTTTGGATTTTGCAAGTCCATCACTAACCTTACCAAGCTGATGTTTCCAAATAATTTGATAACAGGCAGCATTCCATCAGAGTTTGGCACATGCATAAATTTAAAATCAGTGGACTTTAGCTTCAACTACTTGAACGGCCCGATTCCTTCTGAAATATGGTCACTGCCGAAACTAACGGATCTGATAATGTGGGCGAATAACCTTGAAGGCAAAATTCCTGAAAATATATGCACTGATACAATAGCCATTTCGAATTTTGAGATGTTGATCCTTGGCTACAATAACTTATCGGGTAAGATCCCTGAGTCGCTTGCATACTGCACAAATTTAATATGGGTGTCTTTATCAGGTAATAAGTTTACTGGAAAAATCCCTGAAAGAATCGGAAACTTGAAGAAACTTGCAATACTTCAGTTGGGAAACAATGTATTGTCTGGTAATATTCCTCCTGATATTGGGAACTGTGAGAGTTTGATATGGTTGGATTTGACTAACAACTCGCTATCAGGTCCGATACCGGGTTCCATCGCTGCACAAACGGGTTTAATTGCACCGGGTATGGTATCTGGAAAGCATTTTGCTTTCTTGAGAAATGAAGCTGGAAACATCTGTCCTGGAGCAGGAGTTCTATTTGAATTCGAAGGTATCAGACCCGAAAGACTTTCAAATTTTCCAGTAGTGAACTCGTGTCCATCAACTAGAATATATACGGGTACGACTGTTTATACTTTCGGTGGCAATGGGAGCATAATATACATGGATTTGTCTTACAATCTTCTTAATGGGTCCATACCCTCTGAGTTTGGGCCTATGAAGTTCCTCCAAGTGTTGAATTTGGGCCATAACGAGTTAACGGGTGGGATACCGACGTCTTTTGGAGGAATGAAGACACTTGGTGTTTTAGATCTTTCTCATAATCAGCTGAGCGGGAACATCCCTGGTGATTTGGCTAGTCTATCTTTTCTGAACGATATGGATGTGTCCTATAATAATTTATCCGGCCCAATTCCCACCGGCGGCCAGTTCAGTACATTTTTGCCATCCAGGTATGATCACAATTTGGGTCTTTGTGGGGTCCCGTTGCCTCGGTGTGGGTCCGGCGATCCAAATTCAAATTCAAATTCAAGTTCAAAGGGAAGAAGAAGAATCTTTGGTGGTGGAAGTATGATAGTCGGTATAGTCTTTGCTTTCCTCATCATAGTCACACTACTTGTAGCGCTTTATAGAATCCGAAAATACCATAAAAACGGAGAAGGTAAGAATTCATATATTCAAAGTTTTACGGCTTCTGTCAGCACCAACGGCGGCGGCGAAACATCGAATTGGAAATTCTCGACCGACCCAGCAAAAATCACGTTAGAGACATTCGACAAACCATTAAGAAACTTAACGTTCGCGCATTTAGTGGAGGCCACAAACGGGTTCAGCCCGGACACCCTTATCGGGTCGGGCGGGTTCGGTGACGTCTTCAAGGCGAAACTCGGGGATGGGTCCACGGTCGCGGTCAAGAAGCTGGTTCGGTTCGCGGGCCAAGGAGACCGCGAGTTCACCTCCGAGATGGAGACCATTGGCAAAATCAAGCATAGAAACCTAGTGCCATTGCTAGGCTACTGCAAAGTGAACGAGGAACGGATCCTGGTGTACGAGTACATGAAGCACGGAAGCCTCGACGTGTCGATTCAAACCAAACGTCAGTCTCTGGACTGGGCCACGAGGAAGAAGATTGCGATAGGGGCGGCCCGTGGGCTTGCTTTCCTTCACCATAGCTGCATCCCTCATATCATACATAGGGACATGAAATCGAGCAACGTGCTGCTTGATGAAAATTTCAATGCACGGGTGTCGGATTTCGGGATGGCCCGGTTGATGAATGCCGTGGATACCCATTTGAGTGTGAGCACGCTAGCGGGTACGCCCGGGTACGTGCCTCCGGAATACTATCAAAGCTTTAGGTGCACCACCAAAGGGGATGTGTACAGTTATGGTGTGGTGCTTTTGGAGCTTTTAACGGGTAGGAAGCCCATCGACCCGTTGGATTTCGGGGATAATAACTTGGTGGGTTGGGCCAAGAATTTGGCGAAGGAGAATCGGAGTGGGGAAATATTTGATGGAGAGTTGATGGGGAGGAATTCGGGTGAGGGGGAGGTTTATAAGTGTTTGAAGATAGCGTTTGAATGCTTGGATGATAGACCGTTTAAGAGACCTACTATGATTCAGGTAATGGCTATGTTTAAAGAGATTGATCAAGCTGATTTTGATAGTGAGTTTTCTGATGCGTTTTCGATTGGGAAGTCTGTTATTGATGAAACTAAAGAGAAAGGGCCTTGATTTTGTTAAAAGTGAAGAAGCGAAAATTGTAATCATATTTAGTTTTGTATCTGTAGACTGTATGTAAGTTCTGTGTATATGATTTGTTGTATAGTAGCCTGTTAAAGAATCGATGTTGGTACAGTTAGCATTCTGTTTAACGTTGCACTAGTTACTTTCGATGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267578.1	1.3e-250	brassinosteroid LRR receptor kinase BRL1-like
Swissprot	Q69JN6.1	1.0e-196	BRI1-like receptor kinase 1
trEMBL	A0A5P1ER22	9.2e-251	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G55610.1	54.59	0.0	1286	BRL1	BRI1 like

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC5G05506	AT1G55610.2	1220	474	16	9	1215	14	1166	54.59	1286
AfisC5G05506	AT1G55610.1	1220	474	16	9	1215	14	1166	54.59	1286
AfisC5G05506	AT3G13380.1	1204	471	12	22	1215	26	1164	54.65	1274

Ortholog group

Species	Genes
Allium cepa	g33154.t1; g69389.t1
Allium fistulosum	AfisC5G05506
Allium sativum	Asa1G00720.1
Arabidopsis thaliana	AT1G55610.1; AT1G55610.2; AT3G13380.1
Oryza sativa	LOC_Os08g25380.1; LOC_Os09g12240.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	28	67	41.5	1.1e-10
PF13516.3	LRR_6	Repeat	220	236	11.7	0.2
PF00560.30	LRR_1	Repeat	249	271	11.8	0.25
PF13855.3	LRR_8	Repeat	714	772	32.0	6.9e-08
PF00069.22	Pkinase	Domain	918	1182	154.8	2.4e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001578	P	microtubule bundle formation
GO:0001653	F	peptide receptor activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0004903	F	growth hormone receptor activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005496	F	steroid binding
GO:0005524	F	ATP binding
GO:0005768	C	endosome
GO:0006468	P	protein phosphorylation
GO:0009507	C	chloroplast
GO:0009554	P	megasporogenesis
GO:0009556	P	microsporogenesis
GO:0009611	P	response to wounding
GO:0009647	P	skotomorphogenesis
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009734	P	auxin-activated signaling pathway
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010224	P	response to UV-B
GO:0010233	P	phloem transport
GO:0010234	P	anther wall tapetum cell fate specification
GO:0010268	P	brassinosteroid homeostasis
GO:0010305	P	leaf vascular tissue pattern formation
GO:0010584	P	pollen exine formation
GO:0019901	F	protein kinase binding
GO:0042803	F	protein homodimerization activity
GO:0043234	C	protein complex
GO:0046982	F	protein heterodimerization activity
GO:0048366	P	leaf development
GO:0060548	P	negative regulation of cell death
GO:1900140	P	regulation of seedling development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13415	BRI1; protein brassinosteroid insensitive 1	EC:2.7.10.1 2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network