result

Gene information

Detail information of AfisC5G05612

Location

Gene	Chr	Start	End	Strand
AfisC5G05612	chr5	1038470149	1038475801	+

Sequences

CDS

>AfisC5G05612
ATGGTTTCTTGTTTATTCCACGCATTAAGGTTTGGAAAGAAAAAGTCAAGTAATTCCATATCAATACCTCCCCCACGACCACCGTCACTTTCAACATTGCACAGAAGAAACACACTTTCTCCCGATTTACAAATAATGGAAAAAAGGAGATGGGACAGTTCGGAATCTTGGTCTGTTTTATTGGATTCTGGAAACTTTGAGGGATTTGATGCAAATGTAGCAGGAGAGCAGGAAGAATGGATGGCTGATCTTTCTCAATTGTTTATTGGGAATAAGTTTGCTTCTGGTGCACATAGTAGAATATACAGAGGTATATATAAGCAGAGAGCAGTAGCTGTGAAAATGGTCAGACTGCCTGATCAAGATCCGCATACAAGAGAGAGGCTTGAGGAGCAGTTCAAGTCAGAAGTTGCATTTCTTTCTCGACTCTGTCATCCTAATATTGTGCAGTTCATAGCAGCATGTAAGAAACCACCAGTGTACTGCATTATCATGGAATACATGTCTCAAGGTACACTGAAAACATACCTACACAAGAAAGAGCCATACTCTCTATCAACTGAAACGATCGTGAGACTAGCCCTAGATATTTCACGTGGAATGCAGTATCTTCATTCACAGGAAGTAATTCACAGAGACTTGAAATCCGATAATTTACTACTTAATGATGAAATGAGAGTCAAAGTTGCTGACTTTGGCACTTCTTGCCTTGAAACTCAGTGTCAGGCTTCGAAAGGAAACATGGGAACTTATAGATGGATGGCCCCAGAAATGATTAAAGAAAAACCGTACACTAAAAAGGTTGATGTATATAGTTTTGGAATTGTTTTGTGGGAACTCACTAGTGCTCTTGTTCCTTTTCAAGGAATGACCCCTGTTCAAGCTGCTTATGCTGCTTCTGAGAAGAATCTGCGACCTCCTCTGTCAAATACTTGCTCATTATTCCTAAACCATCTGATAAAGAAATGTTGGTCAGCAAGTCCATCCAAGCGACCAGATTTTAGTTATATAGTTACTGCTTTAGAGCAATACGATGAATGCCTGAAAGGGGGACTTCCTATTCTTGTGCATAAAGATCTCAGGATCAAAAAATTATCTTCTTATATTCTCAGAGGATGCATGTCTGCTCAAACATAA

Protein

Gene

>AfisC5G05612
AAAAAAAAAAGAAAAATGAAAAAAGAATGCAAGTCAAGTTTCCTCAAGGAATGGTATATCTCTTTCTTCATGTCAAGTTTCTCCTGATTCTTGTTTGATCTTCATTGACATCTTGAATGTTATGCTGGTTGTTAATATTTCGGTGCTGTAGAATATTCATTCCATCAACTATGTCTTCAAAATCTACGTAGACCAATCCTTGATCCTTCCATTGTCATTCACTAACATTCATACATTGGGAAGAAATTTTCCATTGTCCCAATCTTGCCTTCATATTCATCTAGTCGTTGTTTAACTTCATTGAAAGATGGTTTCTTGTTTATTCCACGCATTAAGGTTTGGAAAGAAAAAGTCAAGTAATTCCATATCAATACCTCCCCCACGACCACCGTCACTTTCAACATTGCACAGAAGAAACACACTTTCTCCCGATTTACAAATAATGGAAAAAAGGAGATGGGACAGTTCGGAATCTTGGTCTGTTTTATTGGATTCTGGAAACTTTGAGGGATTTGATGCAAATGTAGCAGGAGAGCAGGAAGAATGGATGGCTGATCTTTCTCAATTGTTTATTGGGAATAAGTTTGCTTCTGGTGCACATAGTAGAATATACAGAGGTATATATAAGCAGAGAGCAGTAGCTGTGAAAATGGTCAGACTGCCTGATCAAGATCCGCATACAAGAGAGAGGCTTGAGGAGCAGTTCAAGTCAGAAGTTGCATTTCTTTCTCGACTCTGTCATCCTAATATTGTGCAGGTTAGTTTAATACTTGGAAGTTAACACTACACAGAAAAACACACACACACAAAGGCTCACACACTTTTTAATATATTTTTCATACTATAATTTATAGCCATTCTACAAGTTAGTCATGCATAGAAATAGAATTTACAGGAACACAATTTCTAAGTGTTATTTTAGCACTAATATCAATGTCTAACTGATTGAGAAATTGTTATTTTTGCTTAGGATCCTCATCATCGTATTGGTTTATTAACCAATGATATGTTTAAAGTTATAAAAGAATGAAAAATGTCAAACTCGAATTTATAGTAGTCCCTTTGTTCCATGAAAATTTGCATGACACGAATTCTGTGGAACTTATGGAAATCACCAATTTAAGGATGGATCAATATAGCATAGTTTATGATATTTTCTAAGGAAAACCAATTTATTGTTTATGAATATTTATGTAGCGTGGTATGCTTGATAATATAGTTCTGTTCATGAAAATTACTTACTGATGCATTTTTCTTCTTCATTTTATCAGATAATGCATAGAATTTGTAGTATATAGTCTATTTGTTGCATAAAAATTTGCATGACCGTAATTATGTATAGCTTAATGTAATAAATAATTTAATGAAGGATAATGTGACTTAGTTTATAATATTTTCTAGGGAAAAGTAATGAGTAAACGTCTTCTGTAGAGTGGTATACTTGACAAAATAGCTCTATTCATAATTACTTATGGTTTTATTTTTCATTTTTGCGAATAGTAACCTTCTTCACTAATATAAGAGACGGACCAATGTAAGATAGTTTATTTATATTATTTTCTAAGGAAAAATAATGAATACATATTTTTTGTTGCTTGATGTAGTTGATAAGGTAGTTTTGTTCATGCCAATTACTTACTAATGCATTTTTCTCCATTTTATAAAATAATAGCCCTGTTACAAATTAGTCATGCATGGAATTTATATCATACAGTTTCTTTGTTCCATGAATTCTGGGTAACTTATGAAAATCACTAAGTTAAGGAAAAATAATGAACGATTATCTTATGTAGCTTAATCTACCTAACAAGATGGTTTTGCTCATGACAATTACTAATAGATCGTTTCCATTTTATTATATATATAATCAGTTCATAGCAGCATGTAAGAAACCACCAGTGTACTGCATTATCATGGAATACATGTCTCAAGGTACACTGAAAACATACCTACACAAGAAAGAGCCATACTCTCTATCAACTGAAACGATCGTGAGACTAGCCCTAGATATTTCACGTGGAATGCAGTATCTTCATTCACAGGAAGTAATTCACAGAGACTTGAAATCCGATAATTTACTACTTAATGATGAAATGAGAGTCAAAGTTGCTGACTTTGGCACTTCTTGCCTTGAAACTCAGTGTCAGGCTTCGAAAGGAAACATGGGAACTTATAGATGGATGGCCCCAGAAATGATTAAAGAAAAACCGTACACTAAAAAGGTTGATGTATATAGTTTTGGAATTGTTTTGTGGGAACTCACTAGTGCTCTTGTTCCTTTTCAAGGAATGACCCCTGTTCAAGCTGCTTATGCTGCTTCTGAGAAGGTACGGTTTGTTTTTTTCTTTTCATTTAAAAAGTGTTTAATCTTGGTAAATATATTTGGCAACCAAAAGAAAACGTGTTCTTGCTTCTATTAAAACTGTCTTTTGATTTTGAAAGTTAACAAGTGGAAAAATAGTTTGTCAAAACATTCCTTGGTTTAGCTAAAATGTTTACTTGGTGCTTGCACATGAAATCTTACACAACATTAAAAGACCTTTTTTTTTTTTGCATCAAGTTGTTTATTTTATTTTTTTCATTTTGAAAAGCAAAAACGTCACTTCATGCTATCCCAGTGTACCCTGAGCACTTACTGCACTAAGTGTTTTGTAATGTTTTATAACTGTTAAACATTGTGAGTGTTCTTAATGCTTGAAGTTCTTACATTGCATAAACACTTAATAGGGATAAGTTATGGTTGTGAACGAACACACATAAAATAACCAATATTCATTTGTTGGACTTCTTATTGGGAACAAAAGCAAATTACCTGTACATGGACATGAAATGAAGCCAAAACTAGGATGCACCATTAGTCCAGTTAATTTTATGCTTGATATGAGATGTGTGTTTGATGTAACATGGTGTAGATATAACAATGCTGGTGAAGTTCATGTGCTGCTAGATAAAAATATACGAGCACAACTAGTTTGTTTAACTTACTGACTAAACTATAAGTTAAATCTGTGTCATTACACCGGTAAATTTCCAAGTTATAACGCAAATATCTACCATAATTACCCTGGACAGTATGTGTTATTTGTGATTTGATGCTGATTTATATAGCCCATTTGTTGATACCTCTGTGTATTATTGGTGGCTAGCTTATTATAGTAGAATATAGTGAATCTCATGCTTGTCAAAATTGTATGATCATAGATTTAAAATTGCTGAAACGATCTTTGACAACATTGAATAAGTTAGAAACACAAGTGGCAACTTAGGAGTGTTTAAACAACTTAAAATTCTGGCTTGAAATAGCTATTACATTGATAAGTCACAGGTTGAAAGAGAAACTTATCAATTTTGGCAACTACTTAATTATAACAACTTACTAGTTATTTATATCTTGGTGTTAGACAACAGATTTTTAGGGGTTATAAGTTTCAACTTCAAATGAATTGAATTATATCTACCATCATAAGCTTCATATACTTGGGACTTGTTTCATATTTTACAGCTACACTTACTCGTCCAAACACTTATATTTTTAAGGTGATACTATTTACACCCACCTAAACATCTTCTTTCATCCATTTATCCTCTCACCAAATCAAATGCTTAACTCATCCATCCACGTCTACATTTTATAATTTTTTTTATTTTCTCAAAACTATAACATGACTTCTCATTTCTCTCTTCAAACTATGAAATCAAAATTTCTTCATCTGATTACTTTCATCGATCTTTTTATATCTAATGCTTCATCAGTACATATGAATAGGCTTGTCAACGGTCGGGTTCGGTCCGGGTATTATAAAACCCAGACCCAAGCCCGATTACGATAATTTAAACCCGAGACCGAGCAAAACTGCCTGGTATTTCAAATCAATACCCGAGCCCGGCGTGTCGGGCCTTTTAAGTCCGCTGGGTAATACCCGTATATCTAACTCGTAATATTGTTATAATTAAGTAACCGGATCGGGTCTGGGTCGGGCTTGGATAGTAAAAGCAAAACTCGTACCCGCATTAATAGGGCGGATTCGAGACGGGCACGGGCCGAAATCTGTACCGTTGACATGCCTACATATGAATCCTAACAATTTGATTACGACTAAGTCGTTATTGACTTTAATTGTAAGTGAATTTTTCATTTTTTGTAAATTGTGTAACCTTAACTAAAATTAACATAATAAAGAATAATTTGCAGTACAAATTTGATGCAATGGTAGAACATAATAAAGTGTCTTCATTAATACTTCGATCAAAAATACCTAATCATTATTACTTTTGTTGTTGTTTCAACAAGAAAACTAAACACGAACAACGAAACTAATTGTAGTAGGAAACAATACGAGTCAAGATATTTAACTATAATTAAATATATTAAATCATCAACTTCCAATTTGATATTGATAAAATATTTTACGCTGTTCATTTTATTTTCTTCTTCCACTAATTGTTGATAGGGTTAAAAATAGTTATTTGTGAAAATTCGATTGTATTCTATTTCTACAGTGCTCGATGATGCATAACTATTCACGTTTACTTTCAGATCCTCTTAAGTAAGGTGAGTTTTTGTATGATTTCATTTTATTAAATGTTTAAGTGGTATGGAGCAAGTGTTTTGAGTGAGTGTAAATGGTACAAATCTATGTTTACTATTTATCTAAACTAACCAAAAATTACAACTCAAAACTACATAAGTTGTATAAATAAAGTAGTTCCTTACCAATTTGATTCTAAAGTTCATCAGCGTTTTTAACTCAACTAATATTTGTACTTTTTTACCATTCACTTATAATTACTTAAGTTATAACTTGTTCTGTCTCCACGCTATTTCTTTCTTTCTTAGCTGAACTTAAAGTGGTTTCCATGCTATTTCTTTATGTGATTACCATAGTCTTTATCTCTTGGGTAAATTTGAAATTCAGAAGGCTAGCATGTGACAATCTTGTCATATTTTCCACTTAATGCAGATAAGACAGAAAATAAAAGTGCAGACTTTTGTTCTTAACTCAAAAACTAGTTTAATTAGATATAGAAAATTTGTTTCCAAACCAATTTCTCTTAAAATTACTGAAAACTTCACTATTATGTATCATTAAACAATGCATGTTTATTATCCTTGCTTGTATGATTTCCTTTACAGAATCTGCGACCTCCTCTGTCAAATACTTGCTCATTATTCCTAAACCATCTGATAAAGAAATGTTGGTCAGCAAGTCCATCCAAGCGACCAGATTTTAGTTATATAGTTACTGCTTTAGAGCAATACGATGAATGCCTGAAAGGGGGACTTCCTATTCTTGTGCATAAAGATCTCAGGATCAAAAAATTATCTTCTTATATTCTCAGAGGATGCATGTCTGCTCAAACATAACTGAATTGTATGTGTAGTTCTTGCTCACAATCATTTTATGAGTTAAACTTTACTGCATCTGACTTCCTTTATGAGTTTACCGGTCTAGTTCTACGAAAATCCCAGACTAAATGACAGCTTGTTGCTTGAGAATACCAGGATATAGTATGACGTTTTAGATCTTGTTTATCAACTGCATGTATGTATTAAGAGGTCCAAAACATCAATACATTTTGTAAGTTGCTTATTTATATTTTAACGTTTTACAAAATGTTTATAATGAAGAGATAGAGGTTATTTGAAAGTATA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020268125.1	7.7e-170	serine/threonine-protein kinase HT1
Swissprot	Q2MHE4.1	2.4e-144	High leaf temperature protein 1
trEMBL	A0A5P1EYL5	5.5e-170	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G62400.1	75.83	1e-149	526	HT1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05612	AT1G62400.1	331	78	2	46	375	1	330	75.83	1e-149	526
AfisC5G05612	AT5G58950.1	304	158	2	43	344	166	466	46.38	4e-87	318
AfisC5G05612	AT4G31170.3	265	137	0	78	342	122	386	48.30	1e-76	283

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	89	341	222.4	5.5e-66

Gene Ontology

Accession	Ontology	Name
GO:0000187	P	activation of MAPK activity
GO:0001666	P	response to hypoxia
GO:0002831	P	regulation of response to biotic stimulus
GO:0005829	C	cytosol
GO:0004709	F	MAP kinase kinase kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005634	C	nucleus
GO:0005768	C	endosome
GO:0005789	C	endoplasmic reticulum membrane
GO:0005815	C	microtubule organizing center
GO:0008219	P	cell death
GO:0042802	F	identical protein binding
GO:0009617	P	response to bacterium
GO:0009620	P	response to fungus
GO:0009651	P	response to salt stress
GO:0009658	P	chloroplast organization
GO:0009686	P	gibberellin biosynthetic process
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009744	P	response to sucrose
GO:0009750	P	response to fructose
GO:0009873	P	ethylene-activated signaling pathway
GO:0009968	P	negative regulation of signal transduction
GO:0010119	P	regulation of stomatal movement
GO:0010182	P	sugar mediated signaling pathway
GO:0019901	F	protein kinase binding
GO:0031347	P	regulation of defense response
GO:0032101	P	regulation of response to external stimulus
GO:0043507	P	positive regulation of JUN kinase activity
GO:0044431	C	Golgi apparatus part
GO:0046777	P	protein autophosphorylation
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0071281	P	cellular response to iron ion
GO:0098542	P	defense response to other organism
GO:2000035	P	regulation of stem cell division
GO:2000069	P	regulation of post-embryonic root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network