result

Gene information

Detail information of AfisC5G05700

Location

Gene	Chr	Start	End	Strand
AfisC5G05700	chr5	1054475306	1054478745	-

Sequences

CDS

Protein

Gene

>AfisC5G05700
ATGTCATACATCTCATCATCTTCTCTTCTCAAATTTCTCCTCCCGGTCTGCTCACCTCCCTCTTAGCTTTCACAACAAAAATCAAATCAAATAACTTCGAAATACCAAATCCGTCATTATCATATAAATCTTCGAATCTCGCAATATTTTCAATGGTGGCAAACATTCCTGAGCTATCCTCTTCCTCCTCCTACGTCTCCAACGCTTCCTCATCCAACGACACCTCGGCCATCGGCCTCGAGATCGTCAGCCTCTCGAAACTCAGCTTGAATCTCGAGCAGCTACTTATCAGCGACGAGTTCGACTGCACGGATGCGGACGTAATCATCGACAACTCCCCCGTGGGTGTCCACAAATGCATTCTAGCGGCGAGAAGTGGCTTTTTCAGGCAGTTATTTAAAGAGAGTAAGGAGAAGGATGAGGGATTGAAAGGAGTGGAGAAGAGGGAGAAGTATTATATGGATGAGATGATGAAAGAGAAGGGGAAGGTTGGGCGAGAGGCGTTTATGGTGTTTTTGGGGTATCTGTATTCTGGGAGACTGAAGCAATCGCCGGTGGATGTGTCGACGTGTGTTGATGGTGGATGCGCTCATGATTCCTGCCGCCCTGCTGTTGCTTTTGCTGTTGAGATGATGTATGCTAGTTTTGTGTTCCAGATCCCGGAACTGGTTTCTCTATTTCAGGTACAGCTGAATTGTTTCAAATAATCATCATATTGTGAAAGTGAATTATTGTGAAGTAATGATTGTTGAACTTCTTTCAAGAAGTTATTTTGCTTTTGAAGTAGCTACATTCTTATCACACCCAGGCTAGATGGTTATATACTCCTTGACATAACTGAATACTTAAGGACGTGGAATAGAGTTTGAGGTTGAAAAAAGACGTTTATGATAGTTGAGTGATTAAACATGAAGCTTTTACAATCTGCGTGAATATTGGATACATTAATTGTTCTGTAGCTAGACATAAATCAATTGTAATTCTATGTCTAAAAAGAAATGAAATTTTCCTAAAAACTGATCCATACATTGTCTACTGAATTTAAGAGCATTTGGCAGCAATCATTGTAGTACAAAAGGTAATTGATTACTGGATGTACTTCACTATTTTGGCCATGGCTGTAGATTAGTTGAACCCATCATAAACTATAAGAGGGACTACTATTTATGTAAATTTAGAACACTGCTACACTTACTAAAGATTCTTTCCAGGAGTTTGCAAACAATTTTTTTGTTAAGTTCAGTAATTTTTGTAAATTTAACAGCATTTGCATTATACATACATGCATGCATACACATTGTCCTCAAAGAATTAGCAATAAATACTTAGGCTTACTACAAGATTACTGGTAGTTTCCATTTCAAATTATGCATAGCACCTTTGTAGTTTCTTTTGTACCTTTATACGTTTACTTCAGGCCTGTTTGTATTTCTTCACTTATTTACAACCTCACATGCATAGTACCTTTATAGTCACCATTATTCTTATTATGCATAATTATTTGTAATATCTGGTTTATCCCACCAGATAACTTTAACCTGGTGGTACTTCCATTGGAGTAGGATTATGTTGAAGCAAAGGGTAACAGAACGAAATTACCGGTTTCACACCTAATTGTTAACTGAAATGCAAGGTAAAAAGGAAACTTTCCTTAAACTATGTGTTTGTATCATCATACGATGTTTTAAAATCTCAGTTATATTTACTTGTACCTAATTTCATCTTATGTGGCTTTACTTGTATTTGGGTTTTCATATCTTCAATGTGCTCATGTAAGTCTGGTATATAAGCCGACTTTATACCATTTAGAGTACTACGAAGACGTATGTGCAGGGTGATGTCTAGTTTGGTTAATTTATCTGAAGGATCCAGAATGTTTGGATTGGCATCTACTAATAATGAGTCGTAAAAGCCCTTTGACATAATAATAGTACATTTTTTCCATTTACTCATCTATTTTTCAATAATTTTATTATTGTCATAATTTGCTATGTGAATATCTGGGATGAGGACGGTTTAGACAACATAGTTACATTTGCAAAATTTGGCCCCGATTATGAATGCATGACTATGTGAATAGAGGAGACAATGAAAGTTTGAACAACATGGTTGTGTTTGCGAATTTGGCACTGATTATGAATGCATGTAAGTTTAAATGTGAATTTACCGTTCTCACATGTATTTGCTTTGAGAAAAGTTATGTTTTGAAAGAAATTTTCCTTAAAATTATGCATTTGTATCATCAAAAAAAGTTTTGAAGTCTGCCTCCTATAAACATTATCACCATGCATCTGCACGTATGTGGGTTTATGATCCCAAAATATGCATGTAGGTGATGGTAAACCTAAACATATAGTTGTTATCATGTATGAAGAATACTTCTATACTGTGTGGTTAATTTTTTCCAGACACAGAGTAGGATTGAGCTAAAAGTAGTCACATAAAATTTAAGAATCCTTGCGAAGAATGAATTAGCACTTAACTCAGCATTCTTACCTGGATTGGAATTGTTTGCTTCTTCACGGGGCATCATCTGTTTGTGACATACATTTGGGATCTAGGCACATAATTTTTCTAAGAATTTTCATTTTGATGGATGAGAAAGACATATTAGTTACTATATAGAAATGGTTTCTTAGTTATTACTGCATCCTCGGTACTTAACTATGCATATTAGTGGTAATTGTTGGTTGCTATTTATCTATTTGGAAACTTTTTTCCCTGGCTAAATGAGACCAATTCCTTTGACTCCTTCTTCCTAGTCTCATGTCCCCAATTGAATCTGATCTATTCATTATTTATAAAAGATAATATTCGATCGGACCACACTCAAAATGAATGAAGCATGTATCATGGGGACAGATGGCACACCATTAGGGGGATAGAGGAATTGGTGCAGAGCTAAATAGGCTTTTAGAACATGATTGTTAAACCTTCTTTTCTGCTCATGAGATTGTAAAAATAAAGGTATACGGTGTCTACGGTGAAAAGAAGAAAAATAGAAGGGAAGAATGAAGTCACTCAAAGTAACATTATTGCCCAACCCCTCACGATAATATAATTATGTCGTTAAGCTATCTGAAAATATTTTGGGAAAAAGCATGTATTTTTGTCACTTCTGAGATATGTGAGCTAAATTCTAAAGCTTTTTATGCCTAGTCTATGGAGCATTGAAGGAACATGAGATTTATTTACTTTAAATTCCAATTTGTTGGTTTGAGTTTGATATTTTCTGTATTGAATTGGAACATGTGAAGTTTTTGATTAGTGCTTATTTTGGTGGATATTATAGAAAGTGGATCTCCTAGAAATAGAGGAAATGCAACAGCTGCTCTTGTTCATTTATGCAGCGGCGAACGACAGCATCAGAGGTGCAGGCACCTGCAGTCATTGAACCCTTAATGGATCTTGCTAACAGTGGTACGGATAGATGAAAAAGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK64931.1	3.5e-47	uncharacterized protein A4U43_C07F31590
Swissprot	E7BQV0.2	1.3e-43	NPR1 homolog
trEMBL	A0A5P1EK07	2.5e-47	Regulatory protein NPR3-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G45110.1	56.38	1e-42	169	ATNPR3;NPR3	NPR1-like protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05700	AT5G45110.1	149	59	3	30	178	37	179	56.38	1e-42	169
AfisC5G05700	AT4G19660.1	148	54	3	33	178	34	174	57.43	4e-40	161
AfisC5G05700	AT1G64280.1	180	99	6	10	178	15	188	35.56	4e-23	104

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00651.28	BTB	Domain	52	133	31.5	1.4e-07

Gene Ontology

Accession	Ontology	Name
GO:0042787	P	protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0001666	P	response to hypoxia
GO:0005634	C	nucleus
GO:0009653	P	anatomical structure morphogenesis
GO:0008219	P	cell death
GO:0009408	P	response to heat
GO:0009611	P	response to wounding
GO:0009625	P	response to insect
GO:0009682	P	induced systemic resistance
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009817	P	defense response to fungus, incompatible interaction
GO:0019005	C	SCF ubiquitin ligase complex
GO:0009862	P	systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009908	P	flower development
GO:0010112	P	regulation of systemic acquired resistance
GO:0010200	P	response to chitin
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0030162	P	regulation of proteolysis
GO:0031348	P	negative regulation of defense response
GO:0031625	F	ubiquitin protein ligase binding
GO:0043161	P	proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044444	C	cytoplasmic part
GO:0080185	P	effector dependent induction by symbiont of host immune response
GO:0099402	P	plant organ development
GO:1901149	F	salicylic acid binding
GO:2000022	P	regulation of jasmonic acid mediated signaling pathway
GO:2000031	P	regulation of salicylic acid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14508	NPR1; regulatory protein NPR1	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network